ggKbase home page

CHLO_5_261_19

Organism: Chloroflexi genomic scaffolds from RBG 5m depth

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: 18600..19772

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Chloroflexi_57_11_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 390.0
  • Bit_score: 755
  • Evalue 2.80e-215
RNA polymerase sigma factor n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N0P9_ANATU (db=UNIREF evalue=2.2e-124 bit_score=451.4 identity=58.2 coverage=99.23273657289002) similarity UNIREF
DB: UNIREF
  • Identity: 58.0
  • Coverage: 99.0
  • Bit_score: 451
  • Evalue 2.00e+00
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 400.0
  • Bit_score: 450
  • Evalue 5.10e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_57_11_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1173
GTGTCTAATTCGGGCGATCGAAAGTCAATCGACCTGGCATTGCGAGTGTTGGTCGAACGCGCCGATTTACACGGCTGGCTGACGCAGGAAGATGTGCTGGAAGTATTTCCGATGGCAGCCAGTGATAACGATCAGCTCTCTCATTTGATCGCTGCTCTGCGTCTGAAGGGTATCCAGGTATTTACTCAGGAGAAGACCGATGAGCCGGATGTGGAGCTGGTTTTAGGCGAACCGGAAGCGCTGCTTACATTCGAATATGTCGCCAGTGATGATACTGTAAGTCTCTACTTGAAAGAGACAGCGCTCACCCCATTACTCTCTTTGGAAGAAGAGCTTGGTCTGGCAAAGCGCATCGCCCATGCCCGGCAAGCCAAGCGCGAGCTGATGCGGATAATTCCGGGCGAGCGCGACCTCGAAAGCTGTAAAGAGCTGGATGCTCTGATTCAAGACGGGCGCCTGGCGCGCGAGGCGCTGATCAAAGCGAACACCCGGCTGGTGGTTAGCGTTGCGCGTCGTTACCTTGGACGTGGTGTGCCATTTCTGGACCTGATCCAGGAAGGCAACCTGGGCTTGATGAAAGCGGTCGAGAAATTTGAATATCAGCGAGGTTTCCGCTTTTCAACCTATGCGACCTGGTGGATCCGCCAGGGGATTGTTCGCGCAATCGCCGATCAAGGACGGACCATCCGGGTCCCGGTTCATATGGTCGACCGGTTACGCATGGTTCATAAGGCGTCGCGAGAGCTTGAGCAGAAAATTGGCCGTACCCCAACTGCCCAGGAGCTGGCAGAACGGCTGGATCTGGATAGCAGTAAGCTGAACTGGCTGCTCCAGGTCACCCAGCAACCCGTCTCGTTGGAAAGCCCGGTGAGTGGAGAGGACGACGCCGAGCTTGGGATGTATGTCGAAGATATCACTTCGCCCAGCCCGGCGCAGATTACTTATGAAAATATGCTGCGAGAACGTATGGACGAAGTCTTGGGAACCCTGACACCGCGTGAGGCGCGCATTTTGCGCCTGAGGTTTGGCCTGGGACAGGATCGCCCCTACACCCTGGAAGAGGTGGGGCAGAAATTCGGCTTGACTCGTGAGCGCATCCGGCAGATTGAATCCAAGGCCTTGCGCCGCCTGCGCCAACCTTCGCGGGCGCGACTGTTGAGGGATTACAGTTGA
PROTEIN sequence
Length: 391
VSNSGDRKSIDLALRVLVERADLHGWLTQEDVLEVFPMAASDNDQLSHLIAALRLKGIQVFTQEKTDEPDVELVLGEPEALLTFEYVASDDTVSLYLKETALTPLLSLEEELGLAKRIAHARQAKRELMRIIPGERDLESCKELDALIQDGRLAREALIKANTRLVVSVARRYLGRGVPFLDLIQEGNLGLMKAVEKFEYQRGFRFSTYATWWIRQGIVRAIADQGRTIRVPVHMVDRLRMVHKASRELEQKIGRTPTAQELAERLDLDSSKLNWLLQVTQQPVSLESPVSGEDDAELGMYVEDITSPSPAQITYENMLRERMDEVLGTLTPREARILRLRFGLGQDRPYTLEEVGQKFGLTRERIRQIESKALRRLRQPSRARLLRDYS*