ggKbase home page

CHLO_5_369_23

Organism: Chloroflexi genomic scaffolds from RBG 5m depth

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(16607..18022)

Top 3 Functional Annotations

Value Algorithm Source
rpoN; RNA polymerase sigma-54 factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Chloroflexi_54_18_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 471.0
  • Bit_score: 931
  • Evalue 5.90e-268
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 471.0
  • Bit_score: 461
  • Evalue 3.50e-127
RNA polymerase sigma-54 factor n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N5K3_ANATU (db=UNIREF evalue=4.3e-127 bit_score=460.7 identity=51.4 coverage=98.09322033898306) similarity UNIREF
DB: UNIREF
  • Identity: 51.0
  • Coverage: 98.0
  • Bit_score: 460
  • Evalue 4.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_54_18_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1416
ATGCTACAACAGTCCCAGGCTCCCATTACTCGCCCGATAACGACCGCTCACCTGGCGACGACGATGTCGCTGATGAGCCTGACCGCCATCGAGTTGCAAGAGCGAATCGAGGCGGAGTTAGCCTCCAATCCAGCCCTGGAATTGGGCGACAGGCATTACTGCACATCCTGCGGGCGTCCTCAGGCTGAGAAAGGCTCTTGCCCGGTATGCAGCCGGCTTTCAACGGGATCAGGGGAAGAACCCATCGTGTTCGTCTCGCCGCGCGAAGATTTCTATCTGCCTTCCCGCCAGAGCACCTCCAATGGAATACCCAGCGACGAGATCATCGCCGAGACAGACGATTTACCTACCTACGTCTTGCGCCAGATCGCCCCAGAGCTGGCCCCTGATGACCGGCTGCTGGCTGCCCACTTGCTCACCAGCCTGGATGAAGACGGGCTGCTGCGCGTCCCCTTGATCGAGTTCGCCCGCTACCATCACCGACCAACCTCGCACATTGAGCAAATCTTAAGGTTGATCCAGCGCGCTGACCCGGTAGGCGTTGGCTCCCCATCTCCTCAAGGAGCATTGCTTGTGCAACTGGAAGTCCTGGGGGAAACGCAGTCCATCCCCCCCATGACCGACCAGGCCATCCGCCAGGGCATGGACTTGCTCTCCCGGCGCCATTTTACTGAGTTGGGCAAGTTGCTGGGCATCTCAACTTCCCGGGTCAAACAAATCGCCCGCTTCATCAGCGATAACCTGAATCCCTACCCTGCCCGCTCCCACTGGGGCAGTGTTCATCAGGGTGTCGAACCGGCACAGGATGTGTATCACTTCCCCGATATCCTCATCAGCCGGCTGAACGACAACCCCGACTCATCCCTGGTCGTCGAAGTGATCTCTCCACTGGCTGGGATGTTGCACCTGAACTCACTGTTTCGCCAATCGATCCACCTCGCTCCGCCAGACAAGGTCGATGAATGGCAAAACGACCTGGAGCAGGCCTCCCTGCTGATCAAATGCCTGCAGCAGCGCAACCACACCATCGTTCGGCTGATGCAGCGCATCACAGCCATCCAGCGACATTTTATTTTACACGGTGATGCTTTCCTGGAGCCGCTGACACGCGCCAGCCTGGCTGATGAACTCCAGGTGCACGAATCCACTATCTCCCGCGCGGTAGCCGGAAAAGCGGTACAATTGCCCAATGGCAAGATCGTGCCGCTCTCGAAGATGTTCGACCGCAGCCTGCACATCCGCACCGAACTGCGCCAGATTATCGCCCATGAGTGCCGACCACTTACGGATACCGAGATCGCAGCTTTGTTAAAGAAAAAAGGCCACCGGGTGGCTCGCCGCACCGTAGCAAAATACCGTGCTAAGGAGGGCATCCTGCCGGCACATCTACGGCAACCCCTACAGACCGCTGGCTAG
PROTEIN sequence
Length: 472
MLQQSQAPITRPITTAHLATTMSLMSLTAIELQERIEAELASNPALELGDRHYCTSCGRPQAEKGSCPVCSRLSTGSGEEPIVFVSPREDFYLPSRQSTSNGIPSDEIIAETDDLPTYVLRQIAPELAPDDRLLAAHLLTSLDEDGLLRVPLIEFARYHHRPTSHIEQILRLIQRADPVGVGSPSPQGALLVQLEVLGETQSIPPMTDQAIRQGMDLLSRRHFTELGKLLGISTSRVKQIARFISDNLNPYPARSHWGSVHQGVEPAQDVYHFPDILISRLNDNPDSSLVVEVISPLAGMLHLNSLFRQSIHLAPPDKVDEWQNDLEQASLLIKCLQQRNHTIVRLMQRITAIQRHFILHGDAFLEPLTRASLADELQVHESTISRAVAGKAVQLPNGKIVPLSKMFDRSLHIRTELRQIIAHECRPLTDTEIAALLKKKGHRVARRTVAKYRAKEGILPAHLRQPLQTAG*