ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

CHLO_5_395_9

Organism: Chloroflexi genomic scaffolds from RBG 5m depth

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: 10847..11311

Top 3 Functional Annotations

Value Algorithm Source
rnhA; ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 138.0
  • Bit_score: 230
  • Evalue 1.30e-57
rnhA; ribonuclease H (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 137.0
  • Bit_score: 192
  • Evalue 9.90e-47
Ribonuclease H n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DL15_9GAMM (db=UNIREF evalue=1.2e-46 bit_score=191.8 identity=60.6 coverage=87.09677419354838) similarity UNIREF
DB: UNIREF
  • Identity: 60.0
  • Coverage: 87.0
  • Bit_score: 191
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Chloroflexi_55_16_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 465
ATGCCGCTTGAAGCTCCCCCGCGCGTGGTCATCTACACCGATGGCGCCTGCGATCCGAACCCCGGTCCGGGTGGGTGGGCTGCCTTGCTGCAGTATGAAAACCGCGAGAAAGCACTCAGCGGATCGGATCCGCACACCACCAACAACCGTATGGAGCTCACCGCCGCCGTGCAGGCCCTCCAGGCGCTGAGCAGCCCGTGCCAGGTGGAGTTTTACACCGATTCCGAGTATCTCAAGCGCGGCGTTACAGAATGGCTGCCCGGGTGGAGAAAGAGGAACTGGCAGCGTAAGTCAGGCGTGCTGGCAAATGTCGACTTGTGGAAAGCGCTGGATGCTGCCTTGAGACCGCATGCGGTTCGCTGGCATTGGGTGCGCGGCCATTCTGGCCATCCCCAGAACGAGCGCGTCGATCGCCTGGCTCGCCGGGCGATCCGGTCAAATACAGGCTCAACGAAGGTTGTCTAA
PROTEIN sequence
Length: 155
MPLEAPPRVVIYTDGACDPNPGPGGWAALLQYENREKALSGSDPHTTNNRMELTAAVQALQALSSPCQVEFYTDSEYLKRGVTEWLPGWRKRNWQRKSGVLANVDLWKALDAALRPHAVRWHWVRGHSGHPQNERVDRLARRAIRSNTGSTKVV*