ggKbase home page
Advanced Search
Search Help

CHLO_5_1150_3

Organism: Chloroflexi genomic scaffolds from RBG 5m depth

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(1127..5044)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) Tax=RBG_16_Chloroflexi_57_8_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2547
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 999.99
  • Bit_score: 1748
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=6 Tax=Dehalococcoides mccartyi RepID=RPOC_DEHSC (db=UNIREF evalue=0.0 bit_score=1747.6 identity=66.2 coverage=98.85145482388974) similarity UNIREF
DB: UNIREF
  • Identity: 66.0
  • Coverage: 98.0
  • Bit_score: 1747
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_57_8_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3918
ATGTTTGAAGTTAATGACTTCGACGCCGTCAAGATTTCTCTGGCTTCACCGGAACAAATAAAGAACTGGTCCTATGGTGAGGTAACCAAAGCAGAGACCATCAATTACCGGACTCTCAAGCCGGAGAGGGATGGGCTATTCTGTGAGCGCATCTTCGGTCCCACCAAGGATTACGAGTGCTTCTGCGGCAAGTACAAGCGGATTCGCTACAAAGGTGTTATCTGCGACAAGTGCGGTGTTGAGGTGGCCCAGGCCAGGGTGCGCCGGGAGCGAATGGGTCACATTGAGCTGGCGTGCCCGGTGAGTCACGTCTGGTATGCCCGCGGTGTGCCCAGCCGCCTCGGACTGCTCCTCGACCTGTCACCAAGAAACATAGAACGCGTCCTCTATTTTTCGAGCTACATAATCACCGGTGTCAATCAGAAAGCGCTTGACGCGGCAGTCAAGGAGTTGGAAGGGGGTAACGCCCAGGAAATAGCGCAGGGCGAGGCTGAGGTCGAAGCGAAGATCGCCAAGATGACCGAGGCCTCGGTCGAAGAGGTCAACCGCCTCCGGCAGGAATGGGCGACCAAGAAGACCGGGATGGCCGAGGAGGCCGCCGCTGAGCTTGAGCTGATCAGGGACTTTCGCCCGCGCCAGTTGCTGACCGAGGCGCAGCACCAGGAGTTGAGGCAGAAATACGGCCACATTTTTGAAGCTGGAATGGGCGCCGAGGCTATTCTTAAGCTGGTCAAGGATATCAATCTCAACGAATTGCGGAACGAGTTGATCGTGGAGACTCGCTCCAACTCAGGTCAGCGCCGCAAGAAGGCCTCCAAGCAATTGCAGGTGGTGGAGGCATTTCGCCGCAGTGGCAGCAAGCCGGAATGGATGGTCCTCACCATACTGCCGGTGCTCCCTCCCGACCTCCGCCCGATGGTACAGCTCGACGGTGGCAAGTTCGCCATAAGCGGTATCAACGATCTCTACCGCCGTGTGATCAATCGCAACAACCGCCTGCGCCATTTGATGGAGATTGGCGCTCCGGAGATCATCGTTCGCAATGAAAAGCGGATGTTGCAGGATGCTGTTGACTCTTTGATCGATAACAGCCGGCGAGGACAGGCTGCGCCCGCCGCCGGCAACCATAAGCTGAAATCGCTTTCCGACATGCTGCGCGGTAAGCAGGGGCGCTTCCGGCAAAACTTGCTCGGAAAGCGCGTGGACTACAGTGGTCGTTCGGTGATCGTGGTTGGCCCTGATCTCAAGCTCTGGCAGTGCGGGCTTCCCAAGAGAATGGCGCTCGAGCTGTTCAAGCCGTTCGTAATGCGGCGATTGATGCAACTGGGACTGGCACACAATATCAGAAGCGCCCGGCGCCTCGTGGAGAGGGCTAAGCCGGAGGTCTATGACATGCTCGAAGAGGTGGTCAAGGAGCGGCCGGTGCTGCTTAACCGGGCGCCGACTCTCCACCGGCTGAGCATACAGGCTTTTGAACCGGTCCTGATCGATGGCAGCGCGATCCAACTCCATCCCCTCGTGTGTACTGCCTTCAATGCCGACTTTGATGGCGATCAGATGGCTGTTCACGTGCCGCTCTCCAAAGCGGCAGTCAAGGAAGCGCGCGAGGAAATGCTCAGCATCCGGAACATACTAATACCCAGCAGCGGTGAGCCGATCGTTACGCCGACTCTGGACATGGTCCTGGGCTGTTATTACATGACGACCCTGAAGGCCGGGGCCAAAGGGGAAGGCAAGGCCTTCCGCGATTTCGAAGATGCCAAGCTCGGCTTCGACCTGGGTTCGATAGATCTAAGGGCCGAGATCGAAGTCAGGCAGACCGAGGGAGCAAGGCTTAAGACCAGTGTCGGTCGCATTCTCCTGAACGAAGTTCTGCCGGAGAACATCGGATTCTTGAACAGGGTCGTGGACAAGGGGGGGCTTAAGCGAATTGTGTCCGAATGCTCCAGGGTACTGGGGGCTGAAGAAATGGCCAAACTGCTCGACAACATCAAGCTGTTGGGCTTTCGTTTTGCCACCAAGTCCGGGACCACTATCGGTATGAGTGACATCGAAGTACCTGCGGCCAAGGCGGGGCTACTTTCTAGCGCTGAATCGCAGACTACAACCATCGATGGTCAGTATCAGCGGGGACTGATTACCGAGGACGAGCGCTACGATCAGGTCGTTCGAGTCTGGACGGACACGGGCGACAAGATCAAGACCGCGGTGCAGGACAGCCTGAACCGCTATGGCGGAATCTATATGATGGCCACCTCAGGGGCAAAAGGTAATATTACGCAGATAACGCAGATGGCAGGCATGCGCGGCCTGATGACTAACCCTTCCGGGCGGATCATTGATTTTCCCATCAAGTCTAGTTTCCGCGAGGGACTGAGCGTGCTTGAGTATTTCATCTCGACACACGGCGCCCGCAAAGGTCTCGCCGATACAGCCCTGCGCACGTCGGAAAGCGGCTATCTGACACGGCGTCTGATTGACGCCGCCCACGACGTCATCGTCCTCGATACGGACTGCAACACCACCCAGGGCACGTGGATAACAGAACCAAAAGAGAAGGGGCTGCTGCCATCATTTGTCGAACGCATACACGGCCGCTTTGCCGCCGCCAAGGTGGTCCATCCCCAGACCGGGCAGACCATCGTCGACCGCAACGAAGAGATAACTGAGGACAAGGCAGGCGAAATGGCGGCTGCAGCGATAAACCGCGTATACGTACGTTCGCCTTTGAGCTGCCAGTCGCGGCGTGGCGTATGCCAGATGTGCTACGGCCGTGATCTGGCGCGCGGGCACATTGTGGACCTGTTCACAGCAGTTGGCATAATCGCTGCTCAGAGCATCGGTGAGCCGGGCACGCAGCTTACGTTGCGCACGTTCCACACCGGCGGCGTCGTTGGTCTCGACATCACCAGCGGTCTGCCCCGGGTTGAAGAACTGTTCGAAGCGCGGCTGCCTAGGAATCCGGCCATCCTCGCCGACATCAATGGTATCGTCGAGATAGTCCGGAGCGATGAGGGTGACAAGATAAGGATCACCGGGACCGAGGTGTTCCGCACTGAGTACGCTCTTCCCCCTGGTCTGTCCGTGAGGGTGGAAAGCGGGCAGTGGGTGGACGTCGGGACGGTGCTGGCGAGTTCGGGAACAGAAGCGGAAAAAGCGGCGCTTCCTGCTACAACCACTGTGGAACCGGTCATATCCGGCGTCGCCGGACAGGTAACCATCGAAGGCGATCGCCTGGCTGTCACATATGAAGAAAAAGAAGAACGTGAGTATCCCGTGGCGGCGGCCGCTCACATCCGTGTTCAGGCGGGAGATGCGGTCAAAGCAGGACAGCAGCTCACTGACGGTTCTATCAACCCGCAGGAAATGCTGAACATCCTCGGCCGTGATGCCGTCCAGCAGTACCTGGCTGACGAAGTGCAGAGAGTCTACCGCTCGCAGGGTGTGAACATCAACGACAAGCACATCGAGATAATCATCCATCAGATGCTGGCGAAGGTGCGGGCCGACTCTTCGGGCGACACCGAGCTTGTGCCGGGTGAACTGGTAGACCGGTTTACGTATGAAGATGTGAATGCTGAGGTCCTGGCCGAGGGTGGTGAGCCGGCGACAGCGCACACGGTGCTGCTCGGCGTGACGCGTGCCTCACTGAGCACCAATAGCTGGCTGGCGGCGGCCTCATTCCAGGAAACGACCAAGGTCCTGACTGAAGCAGCCGTCAGAGGGGCGGTCGACAGGCTTGGCGGCCTCAAGGAGAACGTTATCATCGGCCGGCTAATCCCGGCCCGCTCCCGTGCATCGCTGGCCGCGGCCGTGACGGCGCCCAAGGAGGAGCCGACAGAAGTCCTGGCCGAGGTCGAGCCGGAACCCTTGGAGCCCGGTGCGCTGCCCGAGCCGGAGTCTGCCCCCGAGACATAG
PROTEIN sequence
Length: 1306
MFEVNDFDAVKISLASPEQIKNWSYGEVTKAETINYRTLKPERDGLFCERIFGPTKDYECFCGKYKRIRYKGVICDKCGVEVAQARVRRERMGHIELACPVSHVWYARGVPSRLGLLLDLSPRNIERVLYFSSYIITGVNQKALDAAVKELEGGNAQEIAQGEAEVEAKIAKMTEASVEEVNRLRQEWATKKTGMAEEAAAELELIRDFRPRQLLTEAQHQELRQKYGHIFEAGMGAEAILKLVKDINLNELRNELIVETRSNSGQRRKKASKQLQVVEAFRRSGSKPEWMVLTILPVLPPDLRPMVQLDGGKFAISGINDLYRRVINRNNRLRHLMEIGAPEIIVRNEKRMLQDAVDSLIDNSRRGQAAPAAGNHKLKSLSDMLRGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKLWQCGLPKRMALELFKPFVMRRLMQLGLAHNIRSARRLVERAKPEVYDMLEEVVKERPVLLNRAPTLHRLSIQAFEPVLIDGSAIQLHPLVCTAFNADFDGDQMAVHVPLSKAAVKEAREEMLSIRNILIPSSGEPIVTPTLDMVLGCYYMTTLKAGAKGEGKAFRDFEDAKLGFDLGSIDLRAEIEVRQTEGARLKTSVGRILLNEVLPENIGFLNRVVDKGGLKRIVSECSRVLGAEEMAKLLDNIKLLGFRFATKSGTTIGMSDIEVPAAKAGLLSSAESQTTTIDGQYQRGLITEDERYDQVVRVWTDTGDKIKTAVQDSLNRYGGIYMMATSGAKGNITQITQMAGMRGLMTNPSGRIIDFPIKSSFREGLSVLEYFISTHGARKGLADTALRTSESGYLTRRLIDAAHDVIVLDTDCNTTQGTWITEPKEKGLLPSFVERIHGRFAAAKVVHPQTGQTIVDRNEEITEDKAGEMAAAAINRVYVRSPLSCQSRRGVCQMCYGRDLARGHIVDLFTAVGIIAAQSIGEPGTQLTLRTFHTGGVVGLDITSGLPRVEELFEARLPRNPAILADINGIVEIVRSDEGDKIRITGTEVFRTEYALPPGLSVRVESGQWVDVGTVLASSGTEAEKAALPATTTVEPVISGVAGQVTIEGDRLAVTYEEKEEREYPVAAAAHIRVQAGDAVKAGQQLTDGSINPQEMLNILGRDAVQQYLADEVQRVYRSQGVNINDKHIEIIIHQMLAKVRADSSGDTELVPGELVDRFTYEDVNAEVLAEGGEPATAHTVLLGVTRASLSTNSWLAAASFQETTKVLTEAAVRGAVDRLGGLKENVIIGRLIPARSRASLAAAVTAPKEEPTEVLAEVEPEPLEPGALPEPESAPET*