ggKbase home page

CHLO_5_1624_6

Organism: Chloroflexi genomic scaffolds from RBG 5m depth

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(3311..4168)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding S1 domain-containing protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 249.0
  • Bit_score: 317
  • Evalue 1.40e-83
RNA-binding S1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 260.0
  • Bit_score: 205
  • Evalue 2.10e-50
RNA binding S1 domain protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EE03_9CHLR (db=UNIREF evalue=2.6e-50 bit_score=204.9 identity=41.4 coverage=86.7132867132867) similarity UNIREF
DB: UNIREF
  • Identity: 41.0
  • Coverage: 86.0
  • Bit_score: 204
  • Evalue 2.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Chloroflexi_62_14_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 858
ATGACGGCAACCTGGTGGTTTCGGTTTCCCAGGCACGCGAGAGCGGCGACTGGCTCGAGGCGCAGCGTCACCTGGAGCAAGGTACCGTCTTCGAGGGCCTGCCCCTCTGGCCACAATCGAGGCGGGCTAATCGTTCCCTTTGGACGGTTGCGGGGATTCGTTCCGGCCTCTCACCTGAGCGACTTGCCCCGAGGCGCCGACGAGGCCAGCCGCGCCGTCTATCTGCAGCGACTTGTCGGGCGCAAGGTTCCACTGCGCGTAATCGAAGTTGACCCCCAGCGACAGCGGCTCGTCCTCTCGGAACGCAAGGCGGTCCGCCAGTGGCGCCAGGAACAAAAGGCGCGCGTGATCGACGATCTGAAGGAAGGCGAGGTCCGCCGGGGGATTGTGACAAGCCTGCGGGAGTTCGGCGCCTTCGTCGATATCGGCGGCTTCGTCGATATCGGCGGGGCCGACGGCCTGATCCACATCTCCGAGATCTCCTGGAAGCATATCGAGGATCCGGGCAAGGTGTTGCACATCGGCGAGGAGGTCGAGGCCCTTGTGCTGCGCCTCGACCGCCAGGCGAACCGGATCGGCCTGAGCCTTAAGCGCTTGCAGCCGAACCCATGGATGTCGGTCGGCGACGGTATTCAGCCCGGCGCCATCCTCGAGGGCACGGTTACACGCCAGTCCAACGACGGCGTGCACGCCGAGTTGGACTGTGGGTTGGAGGGGCGTGTAGCGCTCCTCAATGGCGAGCTGCCGCCTCCCGGCAGCCGCCTGCACGTACGCGTGGTCGAGTTCGATCCGGGCCGGGAGCGCCTGCAGCTGACGATGGTCGAGGGCGAGCCGGAGGCCGAGGCGGCCGCGCCGTGA
PROTEIN sequence
Length: 286
MTATWWFRFPRHARAATGSRRSVTWSKVPSSRACPSGHNRGGLIVPFGRLRGFVPASHLSDLPRGADEASRAVYLQRLVGRKVPLRVIEVDPQRQRLVLSERKAVRQWRQEQKARVIDDLKEGEVRRGIVTSLREFGAFVDIGGFVDIGGADGLIHISEISWKHIEDPGKVLHIGEEVEALVLRLDRQANRIGLSLKRLQPNPWMSVGDGIQPGAILEGTVTRQSNDGVHAELDCGLEGRVALLNGELPPPGSRLHVRVVEFDPGRERLQLTMVEGEPEAEAAAP*