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CHLO_5_1936_12

Organism: Chloroflexi genomic scaffolds from RBG 5m depth

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(9502..9837)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gammaproteobacteria_66_13_curated UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 94.0
  • Bit_score: 131
  • Evalue 9.70e-28
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SDX7_9CHLR (db=UNIREF evalue=2.3e-18 bit_score=97.4 identity=65.0 coverage=69.64285714285714) similarity UNIREF
DB: UNIREF
  • Identity: 65.0
  • Coverage: 69.0
  • Bit_score: 97
  • Evalue 2.00e+00
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 89.0
  • Bit_score: 90
  • Evalue 2.90e-16

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Taxonomy

RBG_16_Gammaproteobacteria_66_13_curated → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
GTGCCCTTGGAAGACAATCTGCTGCCCTCCGGGGCGGGGCCGCATCCGGAGGCGGTGGCGGTGGCCTCGGAAGAGCAGCGGATGCTGATCGAGGCGGTCCGGCGCTTGCCGGGGGATCGACAGGAACTACTGATCCTCAAGTTCGTGGAACGGCTGTCGAACGCCGAGATCGGCGTCATCATGGGGCGGACGGAAGGCGCCATCAAGAGCCTGTACCACCGGACGCTGAACACCCTGCGGGACGAGCTGGCCGGCGCCGACGATCGGGCCCACGCCAGTTGGGATGACCGTGGAGAGAGTTCCGGGTTGGCGGACCCGGAGGGTAGTTCACTATGA
PROTEIN sequence
Length: 112
VPLEDNLLPSGAGPHPEAVAVASEEQRMLIEAVRRLPGDRQELLILKFVERLSNAEIGVIMGRTEGAIKSLYHRTLNTLRDELAGADDRAHASWDDRGESSGLADPEGSSL*