ggKbase home page

CHLO_6_99_20

Organism: Chloroflexi genomic scaffolds from RBG 6m depth

megabin RP 52 / 55 MC: 50 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(20569..21078)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane anti-sigma factor Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 160.0
  • Bit_score: 305
  • Evalue 4.40e-80
20569..21078 - ( gc_cont=0.512) prodigal prediction
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 0
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Chloroflexi_55_16_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 510
ATGGAGGATAGAATCGAAGGGCTGCTTCCCTTTTATATGCTTGGGGCCTTGACTTTGGACGAGCGGGATCATGTCGAAGCATACTTGCAGACTAACCTTGAAGCGCAAGAATGGGTTGAGGAAATGACCTTGGTCACCACGGTTTTGCCTCGCTGTGTTGATCGTGTTGACGCTTCACCGCAAGTTAAAAAGTTGCTCATGGAACGTGTTCGAGAACACAGAGGCGCTCAGCAATTCCCAGCCAGCTTGCGCGGGTTAGTCGATCGACTGCGACAACTGTTTTTCCCCAAGGGAGGCACCGTGTTGCTACCTGTGATGGTTGCATCAATCCTAGTGATAGCCATCGGTTCCCTCACCTGGGCGTTGTCATTGGTGAATAGAGCCTCAGAGTTAGACCAGAAGATTGCCAACCTTCAGGAGCAGCTGGTCAGTCAAGGACTGGTGATCGATCGTCTGCAGGAGCAGTTATTGAATGAACGCGATCGCTCAAATTTCCGCTCCCGGTGTTGA
PROTEIN sequence
Length: 170
MEDRIEGLLPFYMLGALTLDERDHVEAYLQTNLEAQEWVEEMTLVTTVLPRCVDRVDASPQVKKLLMERVREHRGAQQFPASLRGLVDRLRQLFFPKGGTVLLPVMVASILVIAIGSLTWALSLVNRASELDQKIANLQEQLVSQGLVIDRLQEQLLNERDRSNFRSRC*