ggKbase home page

CHLO_6_99_21

Organism: Chloroflexi genomic scaffolds from RBG 6m depth

megabin RP 52 / 55 MC: 50 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(21084..21653)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 189.0
  • Bit_score: 368
  • Evalue 8.00e-99
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 187.0
  • Bit_score: 168
  • Evalue 1.40e-39
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G5V6_CHLAD (db=UNIREF evalue=1.8e-39 bit_score=168.3 identity=47.6 coverage=96.84210526315789) similarity UNIREF
DB: UNIREF
  • Identity: 47.0
  • Coverage: 96.0
  • Bit_score: 168
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Chloroflexi_55_16_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 570
ATGGTACGAGCTGATCTGAGCGACGAGCAGTTAATCAGGCTGATCGCCAGCAGAGATGGAACTGCGCTGGAATACCTCTATGAGCGCTATTCCGCCTCAGTGATGGGGTTAGCGATGAAGATGTTGGGTAACCGGGCTGAAGCGGATGAAGTCGTCCAAGAGACCTTCTGGAGGGTCTGGAGCAAGACAGACTCCTTTCGTGCCGATCGTGGGACGTTGTTGAGCTGGATATTCGCTATTGCCCACAATTTATGTATTGACTTGATACGGCAGCAGAAGGTGAATCCAATGAATTTGGAGGAAGCCCCAATTGTAAATATTGCAGATCACGGAATGAACGAGGCTGCATCGATAAGAGACGCTGTGGAAAGAGAGCAGCTGCAGTCTGCTATGGATGATTTGCCATCGGATCAGCGAGAAGTGATCGAGATGGCATTTTTTAAAGGTCTCACTCGGCAGGAAATAGCGAAGGTGACTGGCGTTCCGCTTGGAACCGTGCATACCCGGGCACGGCTTGGCCTGCAGAAATTACGGACATCGTTACAGGCACGGGGCTTTGACCAGGATTAG
PROTEIN sequence
Length: 190
MVRADLSDEQLIRLIASRDGTALEYLYERYSASVMGLAMKMLGNRAEADEVVQETFWRVWSKTDSFRADRGTLLSWIFAIAHNLCIDLIRQQKVNPMNLEEAPIVNIADHGMNEAASIRDAVEREQLQSAMDDLPSDQREVIEMAFFKGLTRQEIAKVTGVPLGTVHTRARLGLQKLRTSLQARGFDQD*