ggKbase home page

CHLO_6_412_3

Organism: Chloroflexi genomic scaffolds from RBG 6m depth

megabin RP 52 / 55 MC: 50 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(3332..3904)

Top 3 Functional Annotations

Value Algorithm Source
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 190.0
  • Bit_score: 280
  • Evalue 2.20e-72
rimM; 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 183.0
  • Bit_score: 165
  • Evalue 1.20e-38
Ribosome maturation factor RimM n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N5B4_ANATU (db=UNIREF evalue=1.5e-38 bit_score=165.2 identity=43.7 coverage=94.24083769633508) similarity UNIREF
DB: UNIREF
  • Identity: 43.0
  • Coverage: 94.0
  • Bit_score: 165
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Chloroflexi_50_10_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 573
ATGAGTCGCCGGCGGGCATATCCAACCCCAACCAAGGCCGCAGGCTCGCCACTGCCCGGTGAGCCTGCCTTCTTAGCCGTGGGTAAGCTGCGCCACGCCCATGGTGTGCATGGTGAGATGCTCATGGAAGTGCTCACCGACTTTCCTGACCGCCTGCAGCCCGGGATAGTTTTGTACCTGGACCAGGCAGGATCGCAGTTGAAGCTGGTGAAATGCCGGCAACACCGGGAGGGGTTATTAGTGACCTTCGAGGGTTATACGACGCCTGAAGAGGTGGCCCAGTTTCGTAACCAGATCCTTTCTGTGAAGGCAGACGACCGCCCACCTTTAGCGCAGGGCGAATATTATCACCACCAATTGATCGGACTGCAGGTCGTCACACACGCAAGGGTGACCCTCGGCACCGTCACTGAGATCTTGGAGACCGGCGCCAGCGATATATTGGTTGTCCACCCGGAGACCGGGCCAGATGTCTTGATCCCGATTGTGGATGCATTCATCCAGGGGATTGACCTCGCCAGCGGCGAGATAACCGTGCAGCTGATCCCCGGGATGCTGGCTGAGGAGGCTTAA
PROTEIN sequence
Length: 191
MSRRRAYPTPTKAAGSPLPGEPAFLAVGKLRHAHGVHGEMLMEVLTDFPDRLQPGIVLYLDQAGSQLKLVKCRQHREGLLVTFEGYTTPEEVAQFRNQILSVKADDRPPLAQGEYYHHQLIGLQVVTHARVTLGTVTEILETGASDILVVHPETGPDVLIPIVDAFIQGIDLASGEITVQLIPGMLAEEA*