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CHLO_4_53_7

Organism: Chloroflexi genomic scaffolds from RBG 4m depth

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(5095..5688)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 402
  • Evalue 3.10e-109
RNA polymerase ECF-type sigma factor n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4I2_ANATU (db=UNIREF evalue=5.2e-50 bit_score=203.4 identity=55.6 coverage=89.39393939393939) similarity UNIREF
DB: UNIREF
  • Identity: 55.0
  • Coverage: 89.0
  • Bit_score: 203
  • Evalue 5.00e+00
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 178.0
  • Bit_score: 202
  • Evalue 1.20e-49

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Taxonomy

RBG_19FT_COMBO_Chloroflexi_47_9_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 594
GTGAATACCATCGAGCCTGAAGTCCTCAACCAGGTTCAAAAAGGCAATCAAGAAGCATTCACCCATCTGGTTGAGTCATTCCAGAGGTCAGTGTTTAACCTGTGTTATCGAATGTTAGGTGATGCAAGCGAAGCAGAGGATGCCTCGCAAGAAACATTTCTTCGGGTCTATAAGAATATCAAGAACTATGATCACAAACGCCCATTTTCCACCTGGCTATTATCCATTGCAGCTCACCATTGCATTGACCAATTAAGGAAGAGGCGTATGGTTGTTATATCTATGGATGCAGTTCCATATCTCGATCCACCGGATAGCTCTCCAGGACCGGAAAGTTCTTATCATATGCTCGAAGACCAAAAAAAGGTAGAAAATTTACTTAAAACTCTAAATCCACACGATAGAGCGGCGGTAATCATGTATTATTGGTACGATTTTTCATATGAGGAGATTGCACAAAGTCTTTCCATCACTGTCAGTGCAGTCAAGAGTAGGTTACACCGGGCAAGGCTCACCCTTGCACAAACCTGGCAAAAACAAGGCGCGAATAATTTTTCCACTGAAAGGAAAACCCATGAATCACCAGCCTTTTAG
PROTEIN sequence
Length: 198
VNTIEPEVLNQVQKGNQEAFTHLVESFQRSVFNLCYRMLGDASEAEDASQETFLRVYKNIKNYDHKRPFSTWLLSIAAHHCIDQLRKRRMVVISMDAVPYLDPPDSSPGPESSYHMLEDQKKVENLLKTLNPHDRAAVIMYYWYDFSYEEIAQSLSITVSAVKSRLHRARLTLAQTWQKQGANNFSTERKTHESPAF*