ggKbase home page

CHLO_4_367_7

Organism: Chloroflexi genomic scaffolds from RBG 4m depth

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(3304..3903)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RBG_16_Chloroflexi_50_11_curated UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 195.0
  • Bit_score: 344
  • Evalue 1.00e-91
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 195.0
  • Bit_score: 241
  • Evalue 2.40e-61
DNA-directed RNA polymerase subunit alpha n=5 Tax=Dehalococcoides mccartyi RepID=RPOA_DEHSC (db=UNIREF evalue=1.5e-60 bit_score=238.4 identity=57.4 coverage=97.0) similarity UNIREF
DB: UNIREF
  • Identity: 57.0
  • Coverage: 97.0
  • Bit_score: 238
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_50_11_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 600
TTGGCTGGACTATTAGTCCCTAAAATTGAATGTACCGAACAAGCCGAAAACTTCGGGCGATTCATTGCCGAACCCCTGGAGAAGGGATTCGGTATTACTCTGGGCAACTCCCTGCGCCGTGTGCTGCTCGGCTATCTTCCCGGGGCGGCGATAACTCAAGTGAGAATTGAGGGAGTCCAGCATGAGTTCACGGTTATCCCTAACACCAAGGAAGACGTCATGGAGTTCCTGCTCAACATCAAAGAGTTGAGGCTTAAGCCGCTTTCTGAACACGGCGGCATGCTGGTGCTGGAAGTAGAGAAAGAAGGAGCTATTTGTGCCTCGGATATCAAACCTTCGACCGATTTTGATATTACCAACCCGGAGCTTTGCCTGATTACCGTCACCAATCCCAAGTCCCGGCTTTATGTAGAGATGGACGTAGATCTGGGGACAGGTTTCAGGAGCGCCGAGGCAACGGATAATACGCCGGTAGGAACCATACCGGTCGACGCCATCTTTACGCCGATACGCAAGGTGAATTTCACCGTCGAGCCGACTCACCTCGGGCGTGAGACCAGCCGCGAGCGACTGACCCTGGATGTCCGAAGCCGAAGCTGA
PROTEIN sequence
Length: 200
LAGLLVPKIECTEQAENFGRFIAEPLEKGFGITLGNSLRRVLLGYLPGAAITQVRIEGVQHEFTVIPNTKEDVMEFLLNIKELRLKPLSEHGGMLVLEVEKEGAICASDIKPSTDFDITNPELCLITVTNPKSRLYVEMDVDLGTGFRSAEATDNTPVGTIPVDAIFTPIRKVNFTVEPTHLGRETSRERLTLDVRSRS*