ggKbase home page
Advanced Search
Search Help

CHLO_4_417_3

Organism: Chloroflexi genomic scaffolds from RBG 4m depth

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(1149..5159)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RBG_13_Chloroflexi_54_9_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2607
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 999.99
  • Bit_score: 1396
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=6 Tax=Dehalococcoides mccartyi RepID=RPOC_DEHSC (db=UNIREF evalue=0.0 bit_score=1394.8 identity=62.4 coverage=83.6948391922214) similarity UNIREF
DB: UNIREF
  • Identity: 62.0
  • Coverage: 83.0
  • Bit_score: 1394
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Chloroflexi_54_9_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 4011
GTGTTAGATGTTAATGATTTCAATGCCGTACGTATTTCCCTCGCCTCGCCGGAGCAGATAAGGGGCTGGTCTTACGGTGAGGTAACCAAGCCGGAGACCATCAACTATCGCACCCTGAAGCCGGAGAAAGACGGACTATTCTGCGAGAGGATCTTTGGCCCGACCAAAGATTTTGAGTGTTACTGCGGTAAATACAAACGGGTGCGCTATAAGGGCATTATCTGTGACAAATGTGGGGTTGAGATAGCTCGCTCGAAAGTTCGTCGTGAACGCATGGGCCACATCGAGCTAGCTGCACCTGTTGCCCACATCTGGTTTGCGCGGGGGACACCCAGCAGGTTGGCCTTGCTCTTGGATATTTCGCCCCGTATGCTGGAGAGAGTTGTCTACTTCAACCAATATATCGTCACCCATGTGGATGAGGATGCTCGTAAAAAGCTGACAGGGCAATTGCGAGATGATGCCTTGCGTGAGGTGGCCGATCGCCAAGCTAGGGTTGGGGAGAGGTCTGGGCAGATAGGGCTGAGCTTGGAGGAGGAGGTAGGCCAACTGGAATCGGAGAAGGAAGTCGAGGGTGAGCGCGTCGAGGAAGAGCGGGCGGCGGCCATTGACGCAGACATCGACCAGCGGCGGCAGGCGGCGGTGTTGGAGATGGGAGGGCTGCGTCGCCAGTTTGTCCAAGAAAGGGGGAGGTTGGAAGGAGAACTAAGTGCGCAAATCGAGGAACTGGAAGACTTACGCCCCCTTATGCCTATACCCGAGGCCAAGTATCGCGTACTCAAGGAGAAATTCGGCTCGGTGTTCAATGGCGGCATGGGGGCCGAAGCCATCCTGGATATCTTGAGCCGCATGGATATGGAAAAGCTGCGCAAGGATCTGCGCGATGAGATGAATTCGAGCTCCGGTCAGCGGCGGAAGAAGGCTGCTAAGCGTTTACGCCTTATCGAGGCCCTTCACAAGAGCGGCAATAAGCCAGTGTGGATGATCCTCACCGTTTTGCCGGTTTTACCCCCGGAATTACGCCCCATGGTTCAGCTAGACGGCGGCCGCTTTGCCACCAGTGATCTCAACGAGCTCTATCGTCGAGTGATAAATCGAAACAACCGCCTGCGGCGGCTACTAGAGATGCGAGCTCCTGAGATCATCATTCGCAATGAGAAGCGTATGCTTCAGGAGGCAGTGGATGCCCTTATCGATAATGGCCGTCGCGGCCGTGCCGTTGCGGGGACAAGGAATCATAAGCTGAAGTCACTGTCCGACATGTTGGGTGGAAAACAGGGGCGCTTCCGGCAGAACCTTCTGGGCAAGCGCGTCGATTATAGTGGTCGTTCAGTCATCGTCGTTGGGCCCGAACTCCAACTGAATCAGTGTGGTTTGCCCAGGCGCATGGCCTTGGAGCTATTCAAGCCCTTTGTCATGCACTATCTGGTGGGGCAAGGCTATGCTCATAATATCAAAAGCGCCAAGCGGGTGGTGGAAAGGGTACGGCCCGAGGTTTGGGATGCGTTGGAGCATGTGATCAAAGGGCGGCCCGTCCTCTTAAACCGTGCCCCCACCCTCCATCGATTGGGCATTCAAGCCTTCGAACCCGTTCTCATCGATGGCAGTGCCATCCAGATCCACCCTTTGGTCTGTCAGGCCTTCAATGCCGACTTCGATGGTGACCAGATGGCAGTGCATGTGCCCCTCTCTAGGCCGGCGGTTAGAGAGGCCAGGGAGGTGATGATCAGCAGTCACAACATGCTTTCCCCCAGCTCCGGGGATCCCATCATCGCACCAAGGTTGGACATGGTTGTGGGCTGCTATTACCTGACTATCGTAAGGCCAGGAGGCAAGGGGGAGGGGATGACCTTTAGCAGCTTCGATGAGGCCAAGCTGGCCTACGACCTCGGTATCATCGAGCTACAGGCTGAAATAGGAGTCAGGCGTGACAAAGCAAGCGGGGATCGCCTAAAGACTAGCGTTGGTCGTATCATTTTTAATGAGGCTCTCCCTCCGGAGTTGGGTTTCCGAAACATGGTGATGGACAGCAAAGCGCTCAAGCAGATGATTGCCGATTGCTACAAGCAGGTAGGTAACGAGGGTACGGCCCTCGTCGCTGATAGGATCAAGCAATTGGGATTTGAATACGCTACAAAGTCGGGCATAACCATTGCCATCAACGACCTTCAGATCCCCGAAGGCAAGGATAAGTTGCTGCAGGAGGGGGATGTTAAGGTCGCCGATGTTGAGAGCCAGTTTCGACGGGGCTTGATGAGTGAGGAGGAGCGCTCCAATAGCGTGGTGGACATCTGGACCCAGGTCAGTGAGGAGATGTCCGATGTTGTTGCCCGGAGCCTGGATCCTTATGGCTCCATTAGCATGATGGCTAACTCCGGGGCAAAAGGTAATATCGCTCAGATAAAGCAGATGATAGGGATGCGGGGATTGATGGCTGACCCCGCGGGCAGGATCATCGAGCTTCCTATTAGGTCGAACTTCCGAGAGGGGCTGACTGCTCTCGAGTACTTTATCTCCACCCATGGCGCCCGCAAAGGCTTGGCGGATACCGCCTTAAGGACAGCCGATAGCGGCTATCTCACCAGGCGTCTGATCGATGTTGCCCAAGATTCGATCATCTTGGAGGAGGACTGTGGCGCTACCGCCGGCGTTTGGCTTTCCGACGCCTCGGAGAGGGGCCTCCTGGAATCCCTTTCGGAGCGCATCATCGGTAGGCTGGCCGCATCCCGAATTGTTCACCCGCAAACGGGCGAGATCATTGTGGAGCGAAATGAGGAGATCGATGAGGAGAAGGCTGCGGAGATAGCCTCCGCGGGGATCGGGAGGGTCTATGTGAGGTCGCCCCTCACCTGTCAATCTAGACGTGGCGTTTGCCAAGATTGCTATGGCCGCAATCCAGCTACTGGCAGGTTGGTGGCCAAAGGGGAGGCAGTGGGCATAATCGCCGCTCAGAGTATCGGGGAGCCTGGTACGCAGTTGACCATGCGTACTTTCCACACTGGCGGTGTAGCGGGCGTGGATATAACCAGCGGTCTGCCCAGAGTGGAGGAGCTCTTCGAAGCGAGGGTGCCTAAAGGACAGGCCATCGTCAGCGAGATCGATGGCGTGGTGGAGATCCTCACTGCCGACCCGGGGCGTCAGATAAGGGTTGTGAGCTCGGAGATGTACCATGATGACTATCGCCTGCCGGAGGGCTACGAGCTGGTGGTGAGAGACGATGAGTGGGTCGATGCAGGCACGGAACTGGCAAGGGCCTCTGCTGCTCTAGAAGCTGGCGTGGAAGAACGACAAGTGGCAGTGGTTTCTGAGACTGCGTCTATTCTGGCCCGCCTAGCTGGTACCGTGTCTGTTGAAGGCGACAGAATATCGGTGTGGTACGAAGAGAGGGAAGAGCGCTTGTACCCTGTTCCTGCCACCGCCCATATTATTTTGGAAAATGGCGATAGGGTAAGAGCGGGCGACAAACTTACAGAAGGCCCTTTGAACCCTCAAGATGCCTTGCGCATTATGGGGCGCGAAGCCGTCCAGTTATATCTGGTGGAGGAGGTGCAGAAGGTATATCGATCCCAGGGCGTCAATATCAATGACAAGCATATCGAGGTCATCGTTCATCAGATGCTGCGCAAGGTAAGGGTGGACTCGCCGGGCGATACCGATATGCTGCCCGGAGAGTTGGTAGATCGCTTCGTATATGAGGACACCAATGCAAAGGTTCTGGCCGAGGGCGGTGAGCCAGCGACAGCCCAAACAGCGCTATTGGGCGTTACTAAGGCTGCCCTCAATACCGATAGTTTCTTAGCTGCTGCTTCCTTCCAGGAGACTACCAGGGTGCTCACAGAGGCTGCGGTGACTGGCGCTATCGATAGGTTGCAGGGGCTGAAGGAGAACGTAATCATCGGCAAGCTCATTCCCGCCCATGCCGTGACTCCAGCAGGGGGAGCTCCAAGTTTTCAACTAGAGGAGGGTCGGCCTGCTTCGGAAATAGGCACCTTGCCGGCGTTCCCTGAGTAA
PROTEIN sequence
Length: 1337
VLDVNDFNAVRISLASPEQIRGWSYGEVTKPETINYRTLKPEKDGLFCERIFGPTKDFECYCGKYKRVRYKGIICDKCGVEIARSKVRRERMGHIELAAPVAHIWFARGTPSRLALLLDISPRMLERVVYFNQYIVTHVDEDARKKLTGQLRDDALREVADRQARVGERSGQIGLSLEEEVGQLESEKEVEGERVEEERAAAIDADIDQRRQAAVLEMGGLRRQFVQERGRLEGELSAQIEELEDLRPLMPIPEAKYRVLKEKFGSVFNGGMGAEAILDILSRMDMEKLRKDLRDEMNSSSGQRRKKAAKRLRLIEALHKSGNKPVWMILTVLPVLPPELRPMVQLDGGRFATSDLNELYRRVINRNNRLRRLLEMRAPEIIIRNEKRMLQEAVDALIDNGRRGRAVAGTRNHKLKSLSDMLGGKQGRFRQNLLGKRVDYSGRSVIVVGPELQLNQCGLPRRMALELFKPFVMHYLVGQGYAHNIKSAKRVVERVRPEVWDALEHVIKGRPVLLNRAPTLHRLGIQAFEPVLIDGSAIQIHPLVCQAFNADFDGDQMAVHVPLSRPAVREAREVMISSHNMLSPSSGDPIIAPRLDMVVGCYYLTIVRPGGKGEGMTFSSFDEAKLAYDLGIIELQAEIGVRRDKASGDRLKTSVGRIIFNEALPPELGFRNMVMDSKALKQMIADCYKQVGNEGTALVADRIKQLGFEYATKSGITIAINDLQIPEGKDKLLQEGDVKVADVESQFRRGLMSEEERSNSVVDIWTQVSEEMSDVVARSLDPYGSISMMANSGAKGNIAQIKQMIGMRGLMADPAGRIIELPIRSNFREGLTALEYFISTHGARKGLADTALRTADSGYLTRRLIDVAQDSIILEEDCGATAGVWLSDASERGLLESLSERIIGRLAASRIVHPQTGEIIVERNEEIDEEKAAEIASAGIGRVYVRSPLTCQSRRGVCQDCYGRNPATGRLVAKGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGVDITSGLPRVEELFEARVPKGQAIVSEIDGVVEILTADPGRQIRVVSSEMYHDDYRLPEGYELVVRDDEWVDAGTELARASAALEAGVEERQVAVVSETASILARLAGTVSVEGDRISVWYEEREERLYPVPATAHIILENGDRVRAGDKLTEGPLNPQDALRIMGREAVQLYLVEEVQKVYRSQGVNINDKHIEVIVHQMLRKVRVDSPGDTDMLPGELVDRFVYEDTNAKVLAEGGEPATAQTALLGVTKAALNTDSFLAAASFQETTRVLTEAAVTGAIDRLQGLKENVIIGKLIPAHAVTPAGGAPSFQLEEGRPASEIGTLPAFPE*