ggKbase home page

CHLO_4_1177_4

Organism: Chloroflexi genomic scaffolds from RBG 4m depth

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(1691..2443)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:4.2.1.70); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_13_Chloroflexi_48_17_curated UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 243.0
  • Bit_score: 356
  • Evalue 3.20e-95
truA; tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 238.0
  • Bit_score: 217
  • Evalue 6.10e-54
tRNA pseudouridine synthase A n=5 Tax=Dehalococcoides mccartyi RepID=Q3Z951_DEHE1 (db=UNIREF evalue=1.3e-53 bit_score=215.7 identity=49.6 coverage=94.02390438247012) similarity UNIREF
DB: UNIREF
  • Identity: 49.0
  • Coverage: 94.0
  • Bit_score: 215
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Chloroflexi_48_17_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 753
GTGGAGTATGATGGCAGACGTTATTATGGTTTCCAATGGCAAGCCGGTCTGCCTACAATTCAGTCTGAACTGGAGTTGGCTATCCATAAGCTGACTGGAGAAAAGAGCCGTGTCTTAGCTGCCAGCCGGACTGATACCGCGGTGCATGCTAAAGGACAGGTAGTTAGTTTTCGAACGGCTTCTGTCTTATCTCCACAGACAATTCTTAGGGCTTTAAATTACTATTTGCCAGTGGATATAGCGGTTCGGGCGGCTTGTAGAGCCAGTGCCAGTTTTAGTGTCAGGCGCGATGCCGTGAGCCGCGAGTATGAGTATCGGATTTTAAATAGTACCATCCGGTCTCCTCTGGCTGAAGGTTTTACTTATTTGGTGGCAGGTAAATTGAATATCAGGATTATGAATAAGGCGTGTCAGTTACTGAAAGGCAAGCATGATTTTGCTTCCTTTGCTTCTGCATTGGATTCGATGAAGAGCACTGTACGCACTGTATATGAAGCTAAATTTGCCAGAAAAAATACGCTGGTGACCTTTCATATGGTTGCCAATTCCTTTTTGCCTCATCAGGTGCGTAACACTGTAGGTTTGTTTATTAGGGTGGGATTGGGTAAGGTGGGGCTCAAGGAGTTCAGTCAGGTTATGGAGGCAAAAAAAGTGGGCGTGGCGGGACCAGCAGCACCGCCTTATGGATTGTATCTTATCAAAGTTAATTACCCCGCTGATTTGGAGTTGAAATATGAAAACTTATGCAACTAA
PROTEIN sequence
Length: 251
VEYDGRRYYGFQWQAGLPTIQSELELAIHKLTGEKSRVLAASRTDTAVHAKGQVVSFRTASVLSPQTILRALNYYLPVDIAVRAACRASASFSVRRDAVSREYEYRILNSTIRSPLAEGFTYLVAGKLNIRIMNKACQLLKGKHDFASFASALDSMKSTVRTVYEAKFARKNTLVTFHMVANSFLPHQVRNTVGLFIRVGLGKVGLKEFSQVMEAKKVGVAGPAAPPYGLYLIKVNYPADLELKYENLCN*