ggKbase home page

CHLO_4_1253_3

Organism: Chloroflexi genomic scaffolds from RBG 4m depth

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(1946..2554)

Top 3 Functional Annotations

Value Algorithm Source
rhomboid family protein Tax=RBG_16_Chloroflexi_56_11_curated UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 189.0
  • Bit_score: 264
  • Evalue 1.00e-67
protease similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 145.0
  • Bit_score: 131
  • Evalue 2.70e-28
Rhomboid family protein n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D8K1X2_DEHLB (db=UNIREF evalue=3.7e-27 bit_score=127.5 identity=42.8 coverage=69.45812807881774) similarity UNIREF
DB: UNIREF
  • Identity: 42.0
  • Coverage: 69.0
  • Bit_score: 127
  • Evalue 3.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Chloroflexi_56_11_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 609
GTGCCGCTAAGCGATAGAGACTATATGAAAGACCGCTCGTCTCCAACCCCGCGCCGCTCGTGGCGCTTTTCGGGGTGGGGAAGCTCCGACATGGGCCCGCTGTGGACGCTGGTCATCATCAACTTTATCCTGTTTATCGTTACCAACGTTTCGGATACGGTCTATTTTAACCTGGGCATGATACCGGCGTTGCTCTCCGATAAACCGTGGACGCTCGTTACCGCCATGTTCGTTCACGCAAATTTTTTTCATTTTTTCTTTAACATGATCGCCCTCTATTTCTTCGGGAATACGCTCATCAGGATGGTCGGCGCGGGCCGGTTCCTGCTGGCTTATTTCGTCGGTGGAATCGCCGGGAATGTCCTTTTCCTGGTTTTGAACCTATCGTCCCCGGCTATCCTGGTGGGCGCTTCGGGGGCGGTCTACGCCATCGCCGGCGCCCTGGTAGTGATGGTCCCCAATATGAGGATAGCCCTCTGGGGCATAATTCCCATGCCGCTCTGGATTTTCGTCATTGTTTTCCTTGGACTGCTTTCCGCCGCTACAAAAATAACCTCGTCGGCGGCCTCGGCCAGCATCCGGTTGGCGATGCCGAGAAAATCCCGGTAG
PROTEIN sequence
Length: 203
VPLSDRDYMKDRSSPTPRRSWRFSGWGSSDMGPLWTLVIINFILFIVTNVSDTVYFNLGMIPALLSDKPWTLVTAMFVHANFFHFFFNMIALYFFGNTLIRMVGAGRFLLAYFVGGIAGNVLFLVLNLSSPAILVGASGAVYAIAGALVVMVPNMRIALWGIIPMPLWIFVIVFLGLLSAATKITSSAASASIRLAMPRKSR*