ggKbase home page
Advanced Search
Search Help

CHLO_4_2154_2

Organism: Chloroflexi genomic scaffolds from RBG 4m depth

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: comp(406..4344)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RBG_13_Chloroflexi_46_14_curated UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 999.99
  • Bit_score: 2555
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 999.99
  • Bit_score: 1770
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=6 Tax=Dehalococcoides mccartyi RepID=RPOC_DEHSC (db=UNIREF evalue=0.0 bit_score=1764.6 identity=68.1 coverage=96.57273419649657) similarity UNIREF
DB: UNIREF
  • Identity: 68.0
  • Coverage: 96.0
  • Bit_score: 1764
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Chloroflexi_46_14_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3939
ATGCTTGAAGTAAATGATTTTGATGCAGTACGTATCTCCCTTGCTTCACCGGAACAGATAAGAAGCTGGTCTTATGGCGAAGTTACCAAACCGGAGACAATCAACTACCGTACACTCAAACCGGAAAGGGACGGACTCTTTTGTGAAAGGATCTTCGGACCGACTAAAGACTATGAGTGCTTCTGCGGAAAATACAAGAGGATACGTTACAAGGGCGTTATCTGCGATAAGTGCGGAGTAGAGGTAGCCCAGTCGAAGGTAAGGCGTGAACGTATGGGGCATATCGAATTAGCCTGTCCGGTAAGTCATGTCTGGTTTGCTAAAGGTATTCCAAGTCGGATGGGGCTTCTTCTTGATATGTCTCCTCGTAATCTTGAGAGGGTACTCTATTTTTCTCATTATATCGTTACCTCCGTGAATGATAAAGAACGCGAACTGGCATTAGAGCAGGCGGCAGATAATACCCAGGAGGACATTACAGCCCGTCAGGAAGCTCTGGAGACAGTAATTGTCAACATGAACGAAGCAACCGTTGAGGAAGTCAACGATATGCGGAGTAAATGGGAAGAAGAAAAAAAGCTAGTGATAGAGCAGAATAACGCTGAACTGGAACAACTGCGTGATCTGCATGTCAAGATGCTTCTTACTGAGACACAGTACCAGGATCTTTCTCAGAAATATCCCCAGGTATTTACTGCCGGTATGGGAGCCGAAGCCATCTTGCAGATTATCAGAAACATCAATCTTATTGAATTAAAAAACGATCTTCTCCAGGAGACGCGGTCGAACTCGGGTCAGCGACGGAAAAAAGCGAGTAAACAGTTACAGGTCGTTGAAGCTATACGCCGCAGCGGCTCGAAACCGGAATGGATGATTGCTATCGTTCTTCCGGTATTACCTCCTGACCTGAGACCGATGGTGCAGCTCGATGGCGGGAAATTTGCTATCAGTGGTACCAATGACCTGTACCGAAGGGTGATCAACCGAAATAACCGCCTTCGTCACCTGATGGAAACAGGGGCTCCGGAGATCATCATACGTAATGAGAAGAGAATGCTCCAGGAAGCCGTTGATTCGCTTATCGATAACGGTAAGAAGGGGCAGGCATATGCAACCAGCGGGAATCACAAATTGAAATCGCTTTCGGATATGCTCAGAGGAAAACAGGGACGTTTCCGACAGAATCTGTTGGGTAAACGTGTAGATTACAGCGGACGTTCGGTTATTGTTGTTGGTCCGACGTTAAAAATAAACCAGTGCGGTATTCCCCGAAGAATCGCACTGGAATTGTTCAAACCTTTCGTAATGCACCAACTGCTGGAACGCGGTCTGGCTCATAATATCAAAAGCGCCCGAAGGCTGGTCGAGAGAGCGAAACCGGAAATGTACGATATTTTGGAAGAAGTCGTAAAAGAACGTCCGGTATTGCTAAATCGCGCTCCTACGCTACACAGGTTAAGTATCCAGGCATTCGAGCCTGTATTGATTGATGGAAGTGCGATACAGCTTCATCCTATGGTCTGTACCGCTTTCAATGCGGATTTTGATGGCGACCAGATGGCTGTTCACATCCCGTTGTCAAAAGCAGCCGTAAGAGAAGCCCGTGAAACCATGTTGAGCATACATAATATGCTGTTACCGAGTTCAGGTGAACCAATCGTTACTCCCACCCTTGATATAGTTCTCGGGGTTTACTATCTAACATCTATTCGCCCGGGCATGAAAGGCGAAGGAATGATTTTTGGCAGTTTCGAGGAAGCAAAACTTGCGTATGAACTCGGTGTGGTTGATTTCAGGGCTGAAATCAACGTGAGAGATACGAAAAATGATGGCAGCATGATAAAAACCAGTGTCGGTAGAATCATTTTCAATGAAGTGCTGCCTGAACAGATGGGCTTTTACAATGAAATGATAGATAAAACCGGTTTGAAGAATATAGTCATGGGTTGTTCAAAGATATTGAGTGACGAGGAAATGGCAGTCGTACTGGATAATCTGAAAAAACTGGGATTCGATTTTGCGACGAAATCAGGTACTACCGTGGCTATGAATGATATCCAGGTGCCTAGTTCCAAACCTGGGTTGATAGCGGAGGCTGAAGAAAAGACCGCATTACTCGAGAGTCAGTATAGCAGCGGTATAATCACCGAGGACGAAAGATACAGTGGCGTCGTCCAGGCATGGACCGAGACTACAAATAAAATAGGGGATGCTATATCGGACAGCCTTGATCATTACGGCGGAATCTATATGATGGCAAATTCCGGGGCGAAAGGTAACATGTCCCAGATAAGACAGATGGCAGGTCTCAGAGGACTGATGACCAATCCTTCAGGAAGGATTATCGACTTTCCTATCAAATCCAGCTTCCGTGAAGGACTCAGCGTGCTTGAATATTTCATATCTACGCATGGCGCCCGGAAAGGTCTTACTGACACAGCTTTAAGGACGTCTGAAAGTGGACATCTTACACGTCGTCTTATCGATGCATCCCATGACGTTATAGTTCTCGAAGAAGACTGTGGCACCATCGACGGAATATGGATATCCGAGCCGGAGGACAGGAAGCTGTTGCCTTCCTTTGCCGAACGTATGATAGGCCGTCTGGCAGCAAGTCCGGTTGTGCATCCTGAGACAGGCGAGATAATTGTCGAACGAAATGAAGAAATCGATGAAGCGAAGATACAGGAAATAAAAGCAGCAGGAGTTGAAAAAGTCCATGGAAGGTCGCCACTTACCTGTCAATCAAGACGTGGTGTGTGCCAGGCGTGCTACGGGCGGGATCTGTCCCGTGGCAAGATAGTCAATATGAATACGGCAGTTGGCATTATTGCCGCTCAGAGTATCGGTGAACCGGGTACTCAGTTAACCTTGCAGACATTCCATACCGGGGGTGTTGTCGGGCTCGATATTACCAGTGGTCTTCCCAGGGTAGAAGAACTTTTTGAAGCGAGAACGCCTAAAGTACCAGCGATTCTTGCTGACATATCCGGAGTAGCTGAAGTGATAACCGGCGATGACGGAGATAAAATCGAGATTACAAGCACAGAAGTTTTCCGTGACGAATATCCACTGCCCAAAGGCTGGAAAGTGGTGGTTAAGAAAGGACAATACGTAGATATAGGCACTGTCTTGGCTCAACCTGAAGGTTTAAAGAAGACGGGTGAAAAGGGTAAGTCCAAGGATGTCGCAGTAGCCGCTGGAGAACAGGCAGTTATAGCCGGAGTCACCGGTCAGGTAGAGTTAGATGAAGGTCAAATTACCATTGTCTACGAAGAACAGGATAAGAGAGAATATATGATACCGGCTACTATTCCGGTTCGAATAAAGACAGGTGATATGGTGAGGGCGGGACAACAGCTTACCGACGGCTCGGTAAATCCACAGGAAATGCTGCATATTCTTGGGAGAGATGCCGTACAGCAGTATCTCGTTGACGAGGTTCAGAGAGTATACCGTTCACAGGGCGTTAACATCAGTGACAAGCATATTGAAATCATCGCCCACCAGATGCTGAACAAGGTAAGGGTGGATTCTGCCGGAGATACGGAACTGATTCCAGGTGAACTGATAGACAGATTCCAGTACGAGGATATCAATTCGGAAGTGCTGGCCGAGGGTGGTGAACCAACCACGGCTCATACTGTTCTGCTGGGTATTACCAGAGCTTCGTTGAGTACCAATAGCTGGCTGGCTGCAGCTTCGTTCCAGGAAACCACAAGAGTATTAACCGAAGCTGCCCTAAGAGGTGCCACTGATAAGCTGGTTGGATTAAAGGAAAATGTCATTATCGGCAGACTTATCCCTGCCCGTTCACCTGTTTCGGAAGAAATGCTCAGGTTAATGATTAGTGGCAAATCCGACTGGGGGGAAGAACAGGAAGAAAGTATACTGGCTATCAGGGCAGACGAAGCCAATGAGGCTGAACTGGCCATATAA
PROTEIN sequence
Length: 1313
MLEVNDFDAVRISLASPEQIRSWSYGEVTKPETINYRTLKPERDGLFCERIFGPTKDYECFCGKYKRIRYKGVICDKCGVEVAQSKVRRERMGHIELACPVSHVWFAKGIPSRMGLLLDMSPRNLERVLYFSHYIVTSVNDKERELALEQAADNTQEDITARQEALETVIVNMNEATVEEVNDMRSKWEEEKKLVIEQNNAELEQLRDLHVKMLLTETQYQDLSQKYPQVFTAGMGAEAILQIIRNINLIELKNDLLQETRSNSGQRRKKASKQLQVVEAIRRSGSKPEWMIAIVLPVLPPDLRPMVQLDGGKFAISGTNDLYRRVINRNNRLRHLMETGAPEIIIRNEKRMLQEAVDSLIDNGKKGQAYATSGNHKLKSLSDMLRGKQGRFRQNLLGKRVDYSGRSVIVVGPTLKINQCGIPRRIALELFKPFVMHQLLERGLAHNIKSARRLVERAKPEMYDILEEVVKERPVLLNRAPTLHRLSIQAFEPVLIDGSAIQLHPMVCTAFNADFDGDQMAVHIPLSKAAVREARETMLSIHNMLLPSSGEPIVTPTLDIVLGVYYLTSIRPGMKGEGMIFGSFEEAKLAYELGVVDFRAEINVRDTKNDGSMIKTSVGRIIFNEVLPEQMGFYNEMIDKTGLKNIVMGCSKILSDEEMAVVLDNLKKLGFDFATKSGTTVAMNDIQVPSSKPGLIAEAEEKTALLESQYSSGIITEDERYSGVVQAWTETTNKIGDAISDSLDHYGGIYMMANSGAKGNMSQIRQMAGLRGLMTNPSGRIIDFPIKSSFREGLSVLEYFISTHGARKGLTDTALRTSESGHLTRRLIDASHDVIVLEEDCGTIDGIWISEPEDRKLLPSFAERMIGRLAASPVVHPETGEIIVERNEEIDEAKIQEIKAAGVEKVHGRSPLTCQSRRGVCQACYGRDLSRGKIVNMNTAVGIIAAQSIGEPGTQLTLQTFHTGGVVGLDITSGLPRVEELFEARTPKVPAILADISGVAEVITGDDGDKIEITSTEVFRDEYPLPKGWKVVVKKGQYVDIGTVLAQPEGLKKTGEKGKSKDVAVAAGEQAVIAGVTGQVELDEGQITIVYEEQDKREYMIPATIPVRIKTGDMVRAGQQLTDGSVNPQEMLHILGRDAVQQYLVDEVQRVYRSQGVNISDKHIEIIAHQMLNKVRVDSAGDTELIPGELIDRFQYEDINSEVLAEGGEPTTAHTVLLGITRASLSTNSWLAAASFQETTRVLTEAALRGATDKLVGLKENVIIGRLIPARSPVSEEMLRLMISGKSDWGEEQEESILAIRADEANEAELAI*