ggKbase home page

CHLO_4_2225_1

Organism: Chloroflexi genomic scaffolds from RBG 4m depth

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 0 / 38
Location: 2..154

Top 3 Functional Annotations

Value Algorithm Source
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 50.0
  • Bit_score: 86
  • Evalue 1.20e-14
rplT; 50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 48.0
  • Bit_score: 64
  • Evalue 1.00e-08
50S ribosomal protein L20 n=4 Tax=Desulfotomaculum RepID=RL20_DESRM (db=UNIREF evalue=1.3e-08 bit_score=63.9 identity=62.5 coverage=92.15686274509804) similarity UNIREF
DB: UNIREF
  • Identity: 62.0
  • Coverage: 92.0
  • Bit_score: 63
  • Evalue 1.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Chloroflexi_47_15_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 153
CGAGCTGAAGGGCTCTCTTATAGCCAGTTTATGGACGGGCTAAAAAAGGCCAATGTGGAAATCAATCGCAAAGCATTGGCAGATATGGCAGTAAATGACCCGTCCAGCTTCTCCACGTTACTTTCGCTAGCTTCATCCAAAATTAAGAGCTAA
PROTEIN sequence
Length: 51
RAEGLSYSQFMDGLKKANVEINRKALADMAVNDPSSFSTLLSLASSKIKS*