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RBGRP_77_23

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: comp(15272..15676)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 84.0
  • Bit_score: 178
  • Evalue 1.30e-42
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 84.0
  • Bit_score: 178
  • Evalue 6.40e-42
DNA-directed RNA polymerase subunit beta' n=1 Tax=Spirochaeta caldaria DSM 7334 RepID=F8EX17_SPICH similarity UNIREF
DB: UNIREF90
  • Identity: 94.0
  • Coverage: 0.0
  • Bit_score: 177
  • Evalue 1.00e+00

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Taxonomy

Treponema caldarium → Treponema → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 405
ATGAATCCAAGGGAACTTCAAGAGTTCGATAGCATCATGATCAAGCTGGCCTCGCCCGACCAGGTGCGCGCCTGGTCCTACGGCGAGGTCAAGAAGCCGGAAACCATCAACTACCGGACGCTGCGGCCCGAGAAGGACGGGCTGTTCTGCGAGCGCATCTTCGGCACGACCAAGGAATGGGAGTGCTATTGCGGAAAGTTCAAGTCCATCCGCTACAAGGGGGTGATCTGCGACCGCTGCGGCGTGGAGGTCACCCACTTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCTGGTTCTACCGCTCGGTGCCCTCCCGCATGGGCCTGCTGCTGGACCTGGCCATCGTGGCCCTGCGCTCGATCCTGTACTACGAGAAGTACATCGTGA
PROTEIN sequence
Length: 135
MNPRELQEFDSIMIKLASPDQVRAWSYGEVKKPETINYRTLRPEKDGLFCERIFGTTKEWECYCGKFKSIRYKGVICDRCGVEVTHFXXXXXXXXXXXXXXXSGSTARCPPAWACCWTWPSWPCARSCTTRSTS*