ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RBGRP_87_22

Organism: RBG ribosomal protein scaffolds

megabin RP 49 / 55 MC: 45 BSCG 45 / 51 MC: 40 ASCG 0 / 38
Location: 9925..10842

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_14_curated UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 305.0
  • Bit_score: 583
  • Evalue 1.50e-163
DNA-directed RNA polymerase subunit alpha n=1 Tax=uncultured bacterium RepID=K2DEC0_9BACT similarity UNIREF
DB: UNIREF90
  • Identity: 57.0
  • Coverage: 0.0
  • Bit_score: 344
  • Evalue 2.00e+00
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 298.0
  • Bit_score: 248
  • Evalue 2.30e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OP11_Gottesmanbacteria_39_14 → Gottesmanbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 918
ATGGTCGAACCAAAATTTACTATCAAAGAGGAATCCGATACCGATACCTATGGAGAGTATTCTTTCGAACCATTGGAGCAGGGCTATGGTCACACTCTCGGAGTTAGTTTAAGACGCGTTCTGCTTACTTCCCTCAAAGGTGCCGCGATAACTAAAGTCCGGATTGACGGAGTAAAACACCAGTTTTCCACGATTTCCGGTTTAAAAGAAGATGTCATTCAACTTCTTCTTAACGTTAAAAAAATTCGGGTCAAACTACAATCTGATAAATTCACTACTGCAAAATTAAATATTAAAGGTCCGGCTAAGATTTATGCTAAAGATATTGTTTCTTCTGAAGCTGAAATTATTAATAAAGATCTTTATTTGGGAGAACTTACTTCCAGTAAAGTCAAACTCAATATGGAATTAATAATTGAGCCGGGCTACGGTTATGTTCCCTCTGAAGAATACGTAGGTTCTAAAGAATTGAATACTATTATATTGGATGCTTTTTATAGTCCTGTTGCGAGGGTAAACTATCGGGTTGAAGCAACCCGTGTTGGCCGGATGACTAATCTGGATAAACTAATATTAGATGTTTGGACAGATGGAACAATCACTGCACTTTCTGCTATTAAAGAGGCAGCTAAAATTCTGGTTTCCTTCTTTATTCAAATCTATGAACCGAAAGCCAAATCAACAGAAGCAGTAGCGGTAACACCCGCCATCTCTGAGGAAATTCTCAAGATGACTTTGGAGGAATTAGACTTACAGACAAGGATAGTCAATGCCCTTCATAATGGAGGTATTGATACGGTAGGCCAACTATTGGGAACACCTAAAAAAGATTTATATAAAATTAAAAATTTGGGGGCCAAATCAATTACCTATATTGAAGAAGTCTTGAGAAAGAAGGGTATTGCCCTAACAGTCTGA
PROTEIN sequence
Length: 306
MVEPKFTIKEESDTDTYGEYSFEPLEQGYGHTLGVSLRRVLLTSLKGAAITKVRIDGVKHQFSTISGLKEDVIQLLLNVKKIRVKLQSDKFTTAKLNIKGPAKIYAKDIVSSEAEIINKDLYLGELTSSKVKLNMELIIEPGYGYVPSEEYVGSKELNTIILDAFYSPVARVNYRVEATRVGRMTNLDKLILDVWTDGTITALSAIKEAAKILVSFFIQIYEPKAKSTEAVAVTPAISEEILKMTLEELDLQTRIVNALHNGGIDTVGQLLGTPKKDLYKIKNLGAKSITYIEEVLRKKGIALTV*