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ACD5_127_3 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG 		44.5 319.0 259 1.10e-66 sth:STH3047
seg (db=Seg db_id=seg from=227 to=254) iprscan interpro
DB: Seg 		null null null null sth:STH3047
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=19 to=321 evalue=7.9e-109 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 7.90e-109 sth:STH3047
no description (db=HMMSmart db_id=SM00662 from=19 to=227 evalue=6.8e-72 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart 		null null null 6.80e-72 sth:STH3047
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=49 to=171 evalue=3.1e-45 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		null null null 2.80e-45 sth:STH3047
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=49 to=170 evalue=5.6e-41 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		null null null 5.60e-41 sth:STH3047
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=5 to=228 evalue=5.3e-27 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 5.30e-27 sth:STH3047
RNA_pol_L (db=HMMPfam db_id=PF01193 from=29 to=224 evalue=3.7e-23 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 3.70e-23 sth:STH3047
RNA_pol_A_bac (db=HMMPfam db_id=PF01000 from=58 to=151 evalue=3.6e-20 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 3.60e-20 sth:STH3047
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=253 to=320 evalue=3.2e-12 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 3.20e-12 sth:STH3047
RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=255 to=312 evalue=1.3e-11 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 1.30e-11 sth:STH3047
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=252 to=321 evalue=3.3e-09) iprscan interpro
DB: Gene3D 		null null null 3.30e-09 sth:STH3047
RPOA_SPIMX_O98462; (db=BlastProDom db_id=PD001179 from=263 to=320 evalue=0.001 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: BlastProDom 		null null null 1.00e-03 sth:STH3047
RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=4 to=321 evalue=29.859 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HAMAP 		null null null 2.99e+01 sth:STH3047
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] alias=ACD5_455073.4184.7G0003,ACD5_455073.4184.7_3,ACD5_C00127G00003 id=89003 tax=ACD5 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90 		100.0 null 613 4.20e-173 sth:STH3047
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase UNIPROT
DB: UniProtKB 		100.0 321.0 613 1.40e-172 K2FQV5_9BACT