ggKbase home page

ACD60_23_4

Organism: ACD60

near complete RP 46 / 55 MC: 13 BSCG 45 / 51 MC: 3 ASCG 0 / 38
Location: comp(2956..3501)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 181.0
  • Bit_score: 217
  • Evalue 2.60e-54
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B750_THEAS (db=UNIREF evalue=2.0e-54 bit_score=214.0 identity=55.8 coverage=98.3516483516484) similarity UNIREF
DB: UNIREF
  • Identity: 55.8
  • Coverage: 98.35
  • Bit_score: 214
  • Evalue 2.00e-54
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase (db=HMMTigr db_id=TIGR01221 from=2 to=175 evalue=9.9e-89 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.90e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 546
ATGAAAATAGAAACAACCCCCTTGCGTGATGTATTGATTATTAGACCTAATTTATTTTCTGACAAACGCGGATATTTTTATGAAAGTTTTCAGCAGAGCCGTTATGAAAAGCTAGGGCTCCCTCTTTTTATTCAAGATAATGTATCCTTCTCTAAAAAAAATACGTTGCGTGGTTTGCATTATCAATTGCCTTATACCCAAGGAAAATTAGTTTGGGTTTCACGCGGGGCGGTTTTTGATGTGGTGGTGGATCTTCGTTTAAGTTCCCCTACATTTGGGCAATGGTATAGTATTTTATTAACTGACACTGATCATACGCAAATATATGTGCCGCCCGGACTTGCGCATGGTTTTTGTGTGTTGTCAGAAAAAGCAGATTTTTATTATAAATGCACAGATTATTATATGCCTGAAGCAGAGCGCGGGATCATATGGAATGATGCGGGCTTGAATATTGACTGGCCGATTAAAGACCCTATTCTTTCTCCGAAGGATCAAACATTTCTTTCATTGCGCGACATACCTCATGAAAAATTATTCCCATAA
PROTEIN sequence
Length: 182
MKIETTPLRDVLIIRPNLFSDKRGYFYESFQQSRYEKLGLPLFIQDNVSFSKKNTLRGLHYQLPYTQGKLVWVSRGAVFDVVVDLRLSSPTFGQWYSILLTDTDHTQIYVPPGLAHGFCVLSEKADFYYKCTDYYMPEAERGIIWNDAGLNIDWPIKDPILSPKDQTFLSLRDIPHEKLFP*