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ACD60_29_12

Organism: ACD60

near complete RP 46 / 55 MC: 13 BSCG 45 / 51 MC: 3 ASCG 0 / 38
Location: comp(15266..15478)

Top 3 Functional Annotations

Value Algorithm Source
cspA1; cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 69.0
  • Bit_score: 120
  • Evalue 1.70e-25
COLD_SHOCK (db=PatternScan db_id=PS00352 from=18 to=36 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=4 to=70 evalue=1.3e-37 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676)) iprscan interpro
DB: HMMPIR
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-37

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 213
ATGGCAGCACGTGAAACTGGAACCGTAAAATGGTTCAACAATAGCAAAGGTTATGGCTTTATTCAACGCGATCAAGGCGGCGATGTGTTCGTTCATTTTCGAGCTATTCGCGGTGATGGATACCGAACGTTAGAAGAAGGTCAACGAGTCGAATTTTCTGTAGCCCAAGGTCAAAAAGGTCTACAAGCAGAAGACGTTTCTATCGTCGAATAA
PROTEIN sequence
Length: 71
MAARETGTVKWFNNSKGYGFIQRDQGGDVFVHFRAIRGDGYRTLEEGQRVEFSVAQGQKGLQAEDVSIVE*