ggKbase home page

GOSHIP-P18_170_1_13_153S_1017m_2_2997

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_2997_1
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..481
-----------------
DNA (480bp)
protein (160aa)
ifoA_iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=1 Tax=Azoarcus sp. KH32C RepID=H0PTN5_9RHOO
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_2997_2
RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

478..2034
-----------------
DNA (1557bp)
protein (519aa)
putative indolepyruvate oxidoreductase subunit B (EC:1.2.7.8)
Ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WAZ1_MAGSA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
GOSHIP-P18_170_1_13_153S_1017m_2_2997_3

Not on your lists

comp(2080..2964)
-----------------
DNA (885bp)
protein (295aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
Putative 3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YHC5_MOBAS
Uncharacterized protein {ECO:0000313|EMBL:KKN89122.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2997_4
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3191..3901
-----------------
DNA (711bp)
protein (237aa)
hypothetical protein
demethylmenaquinone methyltransferase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036D2103
Acyl transferase {ECO:0000313|EMBL:KJC52654.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2997_5
SAR86 cluster bacterium SAR86A, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4071..4850)
-----------------
DNA (780bp)
protein (260aa)
short-chain dehydrogenase/reductase SDR
2,4-dienoyl-CoA reductase n=1 Tax=SAR86 cluster bacterium SAR86A RepID=J4WT19_9GAMM
2,4-dienoyl-CoA reductase {ECO:0000313|EMBL:EJP71960.1}; TaxID=1123866 species="Bacteria; Proteobacteria; Gammaproteobacteria; SAR86 cluster.;" source="SAR86 cluster bacterium SAR86A.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2997_6
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5115..5504
-----------------
DNA (390bp)
protein (130aa)
rhodanese domain-containing protein
UPI0003D6280F related cluster n=1 Tax=unknown RepID=UPI0003D6280F
Rhodanese domain-containing protein {ECO:0000313|EMBL:AGK05294.1}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
GOSHIP-P18_170_1_13_153S_1017m_2_2997_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5659..6372
-----------------
DNA (714bp)
protein (238aa)
transcriptional regulator, Crp
Transcriptional regulator, Crp n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IT06_RHOCS
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KJB95267.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2997_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6398..7510)
-----------------
DNA (1113bp)
protein (371aa)
hypothetical protein
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I1I5_9BRAD
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase {ECO:0000313|EMBL:EJN12401.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
Displaying 8 items

View Taxonomy