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GOSHIP-P18_170_1_13_153S_1017m_2_204

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_204_1
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..356
-----------------
DNA (354bp)
protein (118aa)
Sel1 domain-containing protein repeat-containing protein
Sel1 domain protein repeat-containing protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KBA5_NITWC
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:ADJ29552.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_trna_1
unknown

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476..550
-----------------
DNA (75bp)
transferRNA Pro
GOSHIP-P18_170_1_13_153S_1017m_2_204_2

Not on your lists

comp(604..1371)
-----------------
DNA (768bp)
protein (256aa)
oxidoreductase
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPD0_9PROT
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:AIF04103.1}; TaxID=1457927 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_170_G02.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_3
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1743..3461
-----------------
DNA (1719bp)
protein (573aa)
fdhB; Tungsten-containing formate dehydrogenase, beta subunit
NADH-quinone oxidoreductase subunit F n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B66CA0
NADH-quinone oxidoreductase subunit F {ECO:0000313|EMBL:EWY39127.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3458..6211
-----------------
DNA (2754bp)
protein (918aa)
formate dehydrogenase
Formate dehydrogenase subunit alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2JI43_9PROT
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:EKE70314.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_5
unknown

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comp(6267..6641)
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_204_6
Arthrospira maxima, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(6638..7582)
-----------------
DNA (945bp)
protein (315aa)
(myosin heavy-chain) kinase (EC:2.7.11.7)
WD-40 repeat protein n=1 Tax=Arthrospira maxima CS-328 RepID=B5W1Y6_ARTMA
WD-40 repeat protein {ECO:0000313|EMBL:EDZ94415.1}; TaxID=513049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira maxima CS-328.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7610..9241)
-----------------
DNA (1632bp)
protein (544aa)
rhodanese domain-containing protein
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7YKS3_9RHIZ
Rhodanese domain-containing protein {ECO:0000313|EMBL:EKE77630.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9232..9840)
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein
Cysteine dioxygenase type I n=1 Tax=Oceanibaculum indicum P24 RepID=K2J3Q7_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
GOSHIP-P18_170_1_13_153S_1017m_2_204_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9881..10915)
-----------------
DNA (1035bp)
protein (345aa)
formate dehydrogenase
Formate dehydrogenase, gamma subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJK9_AZOBR
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:CCC97421.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_10
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11103..11681)
-----------------
DNA (579bp)
protein (193aa)
formate dehydrogenase
Formate dehydrogenase, iron-sulfur subunit n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJK7_AZOBR
Formate dehydrogenase, iron-sulfur subunit {ECO:0000313|EMBL:CCC97419.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11706..14588)
-----------------
DNA (2883bp)
protein (961aa)
formate dehydrogenase, alpha subunit, putative
Twin-arginine translocation pathway signal n=1 Tax=alpha proteobacterium BAL199 RepID=A8TRQ8_9PROT
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EDP64596.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_12
unknown

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comp(14603..14818)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_204_13
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14842..15480)
-----------------
DNA (639bp)
protein (213aa)
molecular chaperone TorD
UPI0003D1AB81 related cluster n=1 Tax=unknown RepID=UPI0003D1AB81
Molecular chaperone TorD {ECO:0000313|EMBL:KIC45590.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_14
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15593..16117)
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GU49_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV29505.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_15
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16110..16619)
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJK2_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:CCC97414.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16632..17246)
-----------------
DNA (615bp)
protein (205aa)
molybdopterin-guanine dinucleotide biosynthesis protein A
Molybdenum cofactor guanylyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JX13_9PROT
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17250..18113)
-----------------
DNA (864bp)
protein (288aa)
formate dehydrogenase
Putative formate dehydrogenase accessory protein FdhD-like n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AJK0_AZOBR
Protein FdhD homolog {ECO:0000256|SAAS:SAAS00093832}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_18
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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18223..20241
-----------------
DNA (2019bp)
protein (673aa)
putative 4Fe-4S ferredoxin, iron-sulfur binding
Putative 4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z981_AZOL4
Putative 4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:CBS85991.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_19
Haemophilus haemolyticus, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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20611..21093
-----------------
DNA (483bp)
protein (161aa)
Sel1 domain-containing protein
Putative tetratricopeptide-like helical n=1 Tax=Haemophilus haemolyticus M19501 RepID=F9GQY2_HAEHA
Putative tetratricopeptide-like helical {ECO:0000313|EMBL:EGT74481.1}; TaxID=1028803 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus haemolyticus M19501.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_20
RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21100..22437)
-----------------
DNA (1338bp)
protein (446aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49)
Uncharacterized protein n=1 Tax=Mycosphaerella fijiensis (strain CIRAD86) RepID=M2Z296_MYCFI
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
GOSHIP-P18_170_1_13_153S_1017m_2_204_21
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22434..22985)
-----------------
DNA (552bp)
protein (184aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase
O-acetylhomoserine/O-acetylserine sulfhydrylase n=2 Tax=Rhodospirillum rubrum RepID=G2TCG0_RHORU
O-acetylhomoserine/O-acetylserine sulfhydrylase {ECO:0000313|EMBL:ABC22875.1}; EC=2.5.1.49 {ECO:0000313|EMBL:ABC22875.1};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23144..23950)
-----------------
DNA (807bp)
protein (269aa)
enoyl-CoA hydratase
Enoyl-CoA hydratase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AL77_AZOBR
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGM31340.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_23
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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24150..24614
-----------------
DNA (465bp)
protein (155aa)
rplM; 50S ribosomal subunit protein L13
50S ribosomal protein L13 n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LNA6_9PROT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_24
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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24617..25099
-----------------
DNA (483bp)
protein (161aa)
30S ribosomal protein S9
30S ribosomal protein S9 n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B44860
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_25
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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25206..26255
-----------------
DNA (1050bp)
protein (350aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZB36_AZOL4
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
GOSHIP-P18_170_1_13_153S_1017m_2_204_26
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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26303..27670
-----------------
DNA (1368bp)
protein (456aa)
oxidoreductase domain-containing protein
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TV43_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP63732.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Displaying 27 items

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