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GOSHIP-P18_170_1_13_153S_1017m_2_214

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_214_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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1..405
-----------------
DNA (405bp)
protein (135aa)
ATPase
MoxR-like ATPase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTH7_9PROT
MoxR-like ATPase {ECO:0000313|EMBL:EDP64115.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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465..1358
-----------------
DNA (894bp)
protein (298aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AP14_AZOBR
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
GOSHIP-P18_170_1_13_153S_1017m_2_214_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1372..4212
-----------------
DNA (2841bp)
protein (947aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6U1_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:CBS86678.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4220..6292
-----------------
DNA (2073bp)
protein (691aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVB2_PARL1
Membrane protein {ECO:0000313|EMBL:EWY41160.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6348..7307)
-----------------
DNA (960bp)
protein (320aa)
methylenetetrahydrofolate reductase
Methylenetetrahydrofolate reductase id=4696384 bin=GWC2_Chloroflexi_73_18 species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
GOSHIP-P18_170_1_13_153S_1017m_2_214_6
Synechococcus sp. PCC 7335, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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7511..8710
-----------------
DNA (1200bp)
protein (400aa)
iron-regulated protein
Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WN06_9SYNE
Putative uncharacterized protein {ECO:0000313|EMBL:EDX85612.1}; TaxID=91464 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. PCC 7335.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_7
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8743..10278
-----------------
DNA (1536bp)
protein (512aa)
thiol oxidoreductase
Thiol oxidoreductase, putative n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C065_ACAM1
Putative thiol oxidoreductase with 2 cytochrome c heme-binding sites {ECO:0000313|EMBL:KIG14367.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10397..11374
-----------------
DNA (978bp)
protein (326aa)
ribF; bifunctional protein riboflavin kinase:FAD synthetase (EC:2.7.7.2 2.7.1.26)
FMN adenylyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS82_AZOS1
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11431..14238
-----------------
DNA (2808bp)
protein (936aa)
ileS; isoleucyl-tRNA synthetase
Isoleucine--tRNA ligase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TPP1_TISMK
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_10
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14271..14735
-----------------
DNA (465bp)
protein (155aa)
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JVZ3_9PROT
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14732..15277
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPS9_PARL1
Uncharacterized protein {ECO:0000313|EMBL:ABS61912.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_12
RIFCSPHIGHO2_01_FULL_Alphaproteobacteria_41_14_curated, Alphaproteobacteria, Proteobacteria, Bacteria

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15456..15869
-----------------
DNA (414bp)
protein (138aa)
glucose-6-phosphate isomerase
Glucose-6-phosphate isomerase id=2998022 bin=GWA1_Alphaproteobacteria_45_9 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
Tax=RIFCSPHIGHO2_01_FULL_Alphaproteobacteria_41_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_214_13
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15903..16751
-----------------
DNA (849bp)
protein (283aa)
glucose-6-phosphate isomerase
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036FD877
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00031329};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16751..18553
-----------------
DNA (1803bp)
protein (601aa)
mutL; DNA mismatch repair protein MutL
DNA mismatch repair protein MutL n=1 Tax=Oceanibaculum indicum P24 RepID=K2JHU7_9PROT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_15
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18590..19153)
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein
Putative methyltransferase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FVM6_PHAMO
Putative methyltransferase {ECO:0000313|EMBL:CCG42414.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_16
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19150..19875)
-----------------
DNA (726bp)
protein (242aa)
rluB; pseudouridine synthase
Pseudouridine synthase n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2Z7Q5_9PROT
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19872..20597)
-----------------
DNA (726bp)
protein (242aa)
putative gamma-glutamyl-gamma-aminobutyrate hydrolase
Glutamine amidotransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JSI1_9PROT
Glutamine amidotransferase {ECO:0000313|EMBL:EKE68075.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_18
alpha proteobacterium IMCC14465, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20678..21145
-----------------
DNA (468bp)
protein (156aa)
cytidine and deoxycytidylate deaminase zinc-binding domain-containing protein
Zinc-binding CMP/dCMP deaminase protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DHH1_9PROT
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1220535 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium IMCC14465.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_19
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21235..21963
-----------------
DNA (729bp)
protein (243aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XJX3_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ34932.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_20
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21997..23229)
-----------------
DNA (1233bp)
protein (411aa)
coenzyme F390 synthetase
Coenzyme F390 synthetase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2M639_9PROT
AMP-dependent synthetase {ECO:0000313|EMBL:AKH19398.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_21
RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated, Rokubacteria, Bacteria

Not on your lists

23356..25038
-----------------
DNA (1683bp)
protein (561aa)
enoyl-CoA hydratase/isomerase family protein
benzoyl-CoA-dihydrodiol lyase (EC:4.2.1.17); K15513 benzoyl-CoA-dihydrodiol lyase [EC:4.1.2.44] id=14627885 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GOSHIP-P18_170_1_13_153S_1017m_2_214_22
RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated, Rokubacteria, Bacteria

Not on your lists

24995..26461
-----------------
DNA (1467bp)
protein (489aa)
bdxB; benzoyl-CoA oxygenase component b
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI0003700BBD
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GOSHIP-P18_170_1_13_153S_1017m_2_214_23
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26579..27460)
-----------------
DNA (882bp)
protein (294aa)
accA; acetylCoA carboxylase, alpha subunit (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H3C0_9PROT
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_24
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27651..28577)
-----------------
DNA (927bp)
protein (309aa)
xerD; site-specific tyrosine recombinase
tyrosine recombinase XerD n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6B928
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_25
RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28577..30343)
-----------------
DNA (1767bp)
protein (589aa)
putative Antifreeze glycopeptide polyprotein
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037AB3B6
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
GOSHIP-P18_170_1_13_153S_1017m_2_214_26
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30623..31186
-----------------
DNA (564bp)
protein (188aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUW9_RHOCS
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_27
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31208..32323
-----------------
DNA (1116bp)
protein (372aa)
3-dehydroquinate synthase
3-dehydroquinate synthase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KHZ3_9PROT
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_28
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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32420..33745
-----------------
DNA (1326bp)
protein (442aa)
Co2 transporter containing CBS domains
Co2 transporter n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HDS4_9PROT
Co2 transporter {ECO:0000313|EMBL:EKV26901.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_29
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(33867..34721)
-----------------
DNA (855bp)
protein (285aa)
taurine catabolism dioxygenase tauD/tfdA
Taurine catabolism dioxygenase TauD/TfdA n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F139_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:ETW98263.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_214_30
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(34868..35281)
-----------------
DNA (414bp)
protein (138aa)
BolA-like protein
BolA family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6083C
BolA-like protein {ECO:0000313|EMBL:CCQ72939.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Displaying items 1-30 of 31 in total

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