ggKbase home page

13_1_20cm_full_scaffold_10290_7

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(3236..3811)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Dehalococcoides ethenogenes (strain 195) RepID=RIMM_DEHE1 similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 157.0
  • Bit_score: 118
  • Evalue 1.00e-23
ribosome maturation protein RimM similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 157.0
  • Bit_score: 118
  • Evalue 1.70e-24
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1432060 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 157.0
  • Bit_score: 118
  • Evalue 8.60e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dehalococcoides mccartyi → Dehalococcoides → Dehalococcoidales → Dehalococcoidia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 576
GTGACTCCCGGGGATCCCACCGAGCTTCGCATCGGCCGGATCACCAAAGCGCATGGCGTCGGCGGCGCCGTGCGAGTCGAGCTCTTGAGCGATTTTCCTGACCGGTTTGCCGCCGGTAACTCGGTTGAGGTCAACGGCCGGCGCCTCACCGTCAATCGCTCGCAGGAGCAGGACGGAAGCTTGCTCGTCAGCTTCAACGAAATCACGGACCGCACGGCGGCGGAGGCACTGACCGGCTCGTATTGCACGGTGCCCCTGGCCGCGGCGCGACGCTTGCCCGCCGACCACTATTACCACTTTCAGCTCGTTGGCCTCTCCGTTTTCGATGCCAGGCGGCAACGAAGCCTCGGTCGGGTGCAGGAAGTCCTCTCCTACGCGGCGAACGACGTGCTTCGCGTGGCAGACGGGCAACGTGAGGTCCTCGTGCCCATGGTCAAGAGCATCGTCCGGGGCATCGAGCCCGACAAGGGCGTCATCCTCGTCGATCTGCCCGTTTCCTGGCCCACTGACCTCCGGCGTCACCGGCCGAGGGATGGCCGCCGGACTGATCAGCCTTCGGATTCACAACCTTCGTGA
PROTEIN sequence
Length: 192
VTPGDPTELRIGRITKAHGVGGAVRVELLSDFPDRFAAGNSVEVNGRRLTVNRSQEQDGSLLVSFNEITDRTAAEALTGSYCTVPLAAARRLPADHYYHFQLVGLSVFDARRQRSLGRVQEVLSYAANDVLRVADGQREVLVPMVKSIVRGIEPDKGVILVDLPVSWPTDLRRHRPRDGRRTDQPSDSQPS*