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13_1_20cm_full_scaffold_33_21

Organism: 13_1_20cm_UNK

megabin RP 54 / 55 MC: 54 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 38
Location: comp(14670..16109)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 483.0
  • Bit_score: 567
  • Evalue 1.30e-158
RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 485.0
  • Bit_score: 561
  • Evalue 3.30e-157
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003749A25 similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 486.0
  • Bit_score: 566
  • Evalue 3.60e-158
  • rbh

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Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAAGCCAACCCTCCAGCTCAAGCTTTCACAACATTTAACGCTCACTCCGCAGCTGCAGCAGTCGATCCGTCTGCTGCAACTTTCGACCCTCGAGCTCAACGCCGAAGTCGAGCGCCTGCTGCAGGAAAATCCGCTGCTGGAAAAAGCCGACGAGGACGAGACGCCGGCGCCGCCGCCCGAGTTTTCGATGGAAGCCAGCACCGCGACCGTGAGTACCGAGTCGTCGGCGAGTGACGATCGCGACGAGCGGTCGGCGGGCGACTTCGATCTGCTGGCTAATGCCGGCGGCGACGGCGACTGGGGTTCGGCCTCGGGCGACGACGACGACGAGAATTTTTCTCCGCAGCAAGTGGCGACCTGCTCGCTGCGCGATCACCTCAACGCGCAGCTCGCGCTTTGTAACCTTCCCCTTCGCGATCGGCAGATCGTATCGGCGCTGATCGACGCGCTGGACGAGGACGGCTATCTGCAGACCTCGCTGGAAGAGCTGGTGGAATTGTTTCCGGACGAGCTCGGTCTCGAAGCCGACGAGCTTTCGATCGGCCTGCGCCGCCTGCAGAACATGGAGCCCGCAGGGGTCGGTGCCCGCGACGCGGCAGAATGTCTGGGCTTGCAGCTGAAAGCGAAGCCGGCCACGACGCCACTGCTGCAGGAGGCGATGAAATTGGTGGAGCAGCATCTGCCTTTGCTTGCCGCGCGTGACTTCGGCAAGCTGAAGCGCCTGCTCCATATCGACGACGCGGAGCTGCGTGGCGTGCGGGCGCTGATCACGAGCCTCAATCCACGTCCCGGCGCCGAATTTTCCAGGACCGAAGCGAACTATGTGATCCCTGACGTGGTCGTACGCAAGGTAAGGGGCAAATGGATCGCGGCGCTCAACGATGCCGCGATGCCCAAGTTGCGGCTGAACCGGATCTACGCCGACATCCTCACCCGTAATCGCGATTCTTCGAACCAGCAGCTCGCGGCGCAGCTGCAGGAGGCGAAATGGCTGATTCGCAACGTCCAGCAGCGATTCGAAACCATCCTCCGGGTGTCGCAGGCGATCGTAGACCGCCAGCGGCATTTTTTTGACCATGGTGACGTGGCGATGCGGCCGATGGTGCTTCGGGAGATTGCCGAAATTCTGAGCCTGCACGAATCGACGATCTCACGCGTAACCACGCAGAAATACATGCTCACCGAGCGAGGAACTTACGAACTCAAGTATTTCTTCGGCAGCCACGTCGCGACCGACACCGGCGGCGCTGCGTCCGCGACTGCGATTCGCGCGCTGATCAAGCAGCTCATTGCCGCCGAGGACCGCAACATACCGCTCACCGACAGCCGCATCGCGGACCTCCTCGGAGATCAGGGGATCGTCGTCGCGCGGCGGACGATCGCGAAATATCGCGAAGCGCTGCAAATACCGCCAGTCAATCTGCGTAAGACGATGTAG
PROTEIN sequence
Length: 480
MKPTLQLKLSQHLTLTPQLQQSIRLLQLSTLELNAEVERLLQENPLLEKADEDETPAPPPEFSMEASTATVSTESSASDDRDERSAGDFDLLANAGGDGDWGSASGDDDDENFSPQQVATCSLRDHLNAQLALCNLPLRDRQIVSALIDALDEDGYLQTSLEELVELFPDELGLEADELSIGLRRLQNMEPAGVGARDAAECLGLQLKAKPATTPLLQEAMKLVEQHLPLLAARDFGKLKRLLHIDDAELRGVRALITSLNPRPGAEFSRTEANYVIPDVVVRKVRGKWIAALNDAAMPKLRLNRIYADILTRNRDSSNQQLAAQLQEAKWLIRNVQQRFETILRVSQAIVDRQRHFFDHGDVAMRPMVLREIAEILSLHESTISRVTTQKYMLTERGTYELKYFFGSHVATDTGGAASATAIRALIKQLIAAEDRNIPLTDSRIADLLGDQGIVVARRTIAKYREALQIPPVNLRKTM*