| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| rpoA; DNA-directed RNA polymerase subunit alpha | similarity |
KEGG
DB: KEGG |
58.8 | 335.0 | 376 | 9.30e-102 | gme:Gmet_0653 |
| rpoA; DNA-directed RNA polymerase subunit alpha | rbh |
KEGG
DB: KEGG |
58.8 | 335.0 | 376 | 9.30e-102 | gme:Gmet_0653 |
| DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXZ7_DESAC (db=UNIREF evalue=2.0e-98 bit_score=363.0 identity=53.85 coverage=87.0466321243523) | similarity |
UNIREF
DB: UNIREF |
53.85 | 87.05 | 363 | 2.00e-98 | gme:Gmet_0653 |
| seg (db=Seg db_id=seg from=277 to=290) | iprscan |
interpro
DB: Seg |
null | null | null | null | gme:Gmet_0653 |
| seg (db=Seg db_id=seg from=125 to=141) | iprscan |
interpro
DB: Seg |
null | null | null | null | gme:Gmet_0653 |
| coiled-coil (db=Coil db_id=coil from=294 to=315 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | gme:Gmet_0653 |
| rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=68 to=361 evalue=6.6e-157 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 6.60e-157 | gme:Gmet_0653 |
| no description (db=HMMSmart db_id=SM00662 from=68 to=275 evalue=5.5e-85 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 5.50e-85 | gme:Gmet_0653 |
| Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=98 to=219 evalue=3.6e-44 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: superfamily |
null | null | null | 3.64e-44 | gme:Gmet_0653 |
| no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=98 to=218 evalue=1.9e-40 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.90e-40 | gme:Gmet_0653 |
| RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=65 to=275 evalue=2.5e-31 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.50e-31 | gme:Gmet_0653 |
| RNA_pol_L (db=HMMPfam db_id=PF01193 from=74 to=273 evalue=1.9e-27 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.90e-27 | gme:Gmet_0653 |
| RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=294 to=353 evalue=2.9e-25 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.90e-25 | gme:Gmet_0653 |
| RPOA_BDEBA_Q6MJ36; (db=BlastProDom db_id=PD001179 from=301 to=368 evalue=1.0e-24 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: BlastProDom |
null | null | null | 1.00e-24 | gme:Gmet_0653 |
| C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=293 to=364 evalue=4.2e-24 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: superfamily |
null | null | null | 4.20e-24 | gme:Gmet_0653 |
| no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=290 to=373 evalue=4.4e-23) | iprscan |
interpro
DB: Gene3D |
null | null | null | 4.40e-23 | gme:Gmet_0653 |
| RNA_pol_A_bac (db=HMMPfam db_id=PF01000 from=107 to=200 evalue=4.1e-21 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.10e-21 | gme:Gmet_0653 |
| RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=8 to=59 evalue=6.1e-12 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: superfamily |
null | null | null | 6.10e-12 | gme:Gmet_0653 |
| RNA_pol_L (db=HMMPfam db_id=PF01193 from=35 to=61 evalue=1.5e-06 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.50e-06 | gme:Gmet_0653 |
| no description (db=Gene3D db_id=G3DSA:3.30.1360.10 from=5 to=59 evalue=1.7e-05) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.70e-05 | gme:Gmet_0653 |
| RNApol_bact_RpoA (db=HAMAP db_id=MF_00059 from=9 to=361 evalue=36.517 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 3.65e+01 | gme:Gmet_0653 |
| DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated |
UNIPROT
DB: UniProtKB |
68.1 | 313.0 | 418 | 1.10e-113 | ggdbv1_88954603 | |
| DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXZ7_DESAC | similarity |
UNIREF
DB: UNIREF90 |
60.6 | null | 375 | 1.80e-101 | gme:Gmet_0653 |
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