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ACD62_102

Alias: ACD62_47563.33011.15

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_102_1

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711..1901
DNA (1191bp) protein (397aa)
elongation factor Tu (EC:2.7.7.4)
elongation factor Tu (EC:2.7.7.4)
Elongation factor Tu 1 n=5 Tax=Cystobacterineae RepID=EFTU1_MYXXD (db=UNIREF evalue=2.0e-171 bit_score=605.0 identity=80.81 coverage=99.4962216624685)
seg (db=Seg db_id=seg from=26 to=38)
ACD62_102_2

Not on your lists


2017..2340
DNA (324bp) protein (108aa)
rpsJ; 30S ribosomal protein S10
RIBOSOMAL_S10 (db=PatternScan db_id=PS00361 from=33 to=48 evalue=0.0 interpro_id=IPR018268 interpro_description=Ribosomal protein S10, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsJ_bact: ribosomal protein S10 (db=HMMTigr db_id=TIGR01049 from=8 to=106 evalue=3.9e-69 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
30S RIBOSOMAL PROTEIN S10 (db=HMMPanther db_id=PTHR11700:SF2 from=7 to=106 evalue=2.4e-57 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACD62_102_3

Not on your lists


2351..3031
DNA (681bp) protein (227aa)
LSU ribosomal protein L3P
50S ribosomal protein L3 n=1 Tax=Synergistetes bacterium SGP1 RepID=D4M8H7_9BACT (db=UNIREF evalue=3.0e-56 bit_score=221.0 identity=51.72 coverage=88.9867841409692)
L3_bact: 50S ribosomal protein L3 (db=HMMTigr db_id=TIGR03625 from=3 to=204 evalue=3.0e-115 interpro_id=IPR019927 interpro_description=Ribosomal protein L3, bacterial/organelle-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L3 (db=HMMPanther db_id=PTHR11229 from=1 to=204 evalue=9.0e-91)
ACD62_102_4

Not on your lists


3060..3677
DNA (618bp) protein (206aa)
50S ribosomal protein L4
Ribosomal protein L4 (db=superfamily db_id=SSF52166 from=1 to=204 evalue=2.6e-51 interpro_id=IPR002136 interpro_description=Ribosomal protein L4/L1e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L4 (db=HMMPanther db_id=PTHR10746 from=19 to=204 evalue=7.5e-46 interpro_id=IPR013005 interpro_description=Ribosomal protein L4/L1e, bacterial-type)
50S RIBOSOMAL PROTEIN L4 (db=HMMPanther db_id=PTHR10746:SF2 from=19 to=204 evalue=7.5e-46 interpro_id=IPR015498 interpro_description=Ribosomal protein L4)
ACD62_102_5

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3674..3958
DNA (285bp) protein (95aa)
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 n=1 Tax=Geobacter sulfurreducens RepID=RL23_GEOSL (db=UNIREF evalue=6.0e-20 bit_score=99.8 identity=53.76 coverage=95.7894736842105)
Ribosomal_L23 (db=HMMPfam db_id=PF00276 from=4 to=89 evalue=4.1e-27 interpro_id=IPR013025 interpro_description=Ribosomal protein L25/L23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal proteins S24e, L23 and L15e (db=superfamily db_id=SSF54189 from=1 to=93 evalue=4.1e-26 interpro_id=IPR012678 interpro_description=Ribosomal protein L23/L15e, core GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_102_6

Not on your lists


4055..4879
DNA (825bp) protein (275aa)
rplB; 50S ribosomal protein L2
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 n=2 Tax=Geobacter RepID=RL2_GEOMG (db=UNIREF evalue=4.0e-88 bit_score=327.0 identity=64.94 coverage=97.8181818181818)
seg (db=Seg db_id=seg from=228 to=244)
ACD62_102_7

Not on your lists


4910..5179
DNA (270bp) protein (90aa)
30S ribosomal protein S19
RIBOSOMAL_S19 (db=PatternScan db_id=PS00323 from=53 to=77 evalue=0.0 interpro_id=IPR020934 interpro_description=Ribosomal protein S19 conserved site GO=Molecular Function: RNA binding (GO:0003723))
rpsS_bact: ribosomal protein S19 (db=HMMTigr db_id=TIGR01050 from=1 to=89 evalue=1.6e-56 interpro_id=IPR005732 interpro_description=Ribosomal protein S19, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
RIBOSOMAL PROTEIN S19P FAMILY MEMBER (db=HMMPanther db_id=PTHR11880 from=1 to=89 evalue=1.9e-39 interpro_id=IPR002222 interpro_description=Ribosomal protein S19/S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_102_8

Not on your lists


5209..5547
DNA (339bp) protein (113aa)
50S ribosomal protein L22
50S ribosomal protein L22 n=14 Tax=Xanthomonadaceae RepID=RL22_STRMK (db=UNIREF evalue=6.0e-19 bit_score=96.3 identity=46.73 coverage=93.8053097345133)
RIBOSOMAL_L22 (db=PatternScan db_id=PS00464 from=83 to=107 evalue=0.0 interpro_id=IPR018260 interpro_description=Ribosomal protein L22/L17, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L22 (db=superfamily db_id=SSF54843 from=1 to=110 evalue=6.4e-31 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_102_9

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5557..6186
DNA (630bp) protein (210aa)
30S ribosomal protein S3 n=2 Tax=Cystobacterineae RepID=RS3_MYXXD (db=UNIREF evalue=7.0e-84 bit_score=313.0 identity=69.08 coverage=98.0952380952381)
rpsC; 30S ribosomal protein S3
rpsC; 30S ribosomal protein S3
coiled-coil (db=Coil db_id=coil from=83 to=104 evalue=NA)
ACD62_102_10

Not on your lists


6251..6676
DNA (426bp) protein (142aa)
50S ribosomal protein L16
RIBOSOMAL_L16_1 (db=PatternScan db_id=PS00586 from=59 to=70 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL_L16_2 (db=PatternScan db_id=PS00701 from=82 to=93 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplP_bact: ribosomal protein L16 (db=HMMTigr db_id=TIGR01164 from=2 to=127 evalue=1.1e-77 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD62_102_11

Not on your lists


6666..6869
DNA (204bp) protein (68aa)
coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
Ribosomal_L29 (db=HMMPfam db_id=PF00831 from=4 to=59 evalue=4.1e-17 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=1 to=60 evalue=5.4e-14 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L29: ribosomal protein L29 (db=HMMTigr db_id=TIGR00012 from=5 to=60 evalue=4.5e-13 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_102_12

Not on your lists


6881..7135
DNA (255bp) protein (85aa)
30S ribosomal protein S17
30S ribosomal protein S17 n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=D3QB87_STANL (db=UNIREF evalue=3.0e-18 bit_score=94.4 identity=51.9 coverage=91.7647058823529)
RIBOSOMAL_S17 (db=PatternScan db_id=PS00056 from=56 to=68 evalue=0.0 interpro_id=IPR019979 interpro_description=Ribosomal protein S17, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S17_bact: 30S ribosomal protein S17 (db=HMMTigr db_id=TIGR03635 from=5 to=76 evalue=9.5e-34 interpro_id=IPR019984 interpro_description=Ribosomal protein S17, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_102_13

Not on your lists


7207..7575
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14
seg (db=Seg db_id=seg from=51 to=73)
RIBOSOMAL_L14 (db=PatternScan db_id=PS00049 from=60 to=86 evalue=0.0 interpro_id=IPR019972 interpro_description=Ribosomal protein L14 conserved site)
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=122 evalue=2.5e-81 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACD62_102_14

Not on your lists


7654..8190
DNA (537bp) protein (179aa)
rplE; 50S ribosomal protein L5
seg (db=Seg db_id=seg from=46 to=59)
RIBOSOMAL_L5 (db=PatternScan db_id=PS00358 from=56 to=72 evalue=0.0 interpro_id=IPR020929 interpro_description=Ribosomal protein L5, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
60S RIBOSOMAL PROTEIN L11-RELATED (db=HMMPanther db_id=PTHR11994 from=3 to=178 evalue=1.0e-89 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_102_15

Not on your lists


8192..8377
DNA (186bp) protein (62aa)
30S ribosomal protein S14
RIBOSOMAL_S14 (db=PatternScan db_id=PS00527 from=23 to=45 evalue=0.0 interpro_id=IPR018271 interpro_description=Ribosomal protein S14, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836 from=1 to=61 evalue=2.9e-23 interpro_id=IPR001209 interpro_description=Ribosomal protein S14 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836:SF6 from=1 to=61 evalue=2.9e-23)
ACD62_102_16

Not on your lists


8431..8832
DNA (402bp) protein (134aa)
30S ribosomal protein S8
RIBOSOMAL_S8 (db=PatternScan db_id=PS00053 from=103 to=120 evalue=0.0 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S8 (db=HMMPfam db_id=PF00410 from=5 to=133 evalue=1.8e-44 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S8 (db=HMMPanther db_id=PTHR11758 from=2 to=133 evalue=1.1e-43 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_102_17

Not on your lists


8913..9455
DNA (543bp) protein (181aa)
50S ribosomal protein L6
50S ribosomal protein L6 n=1 Tax=Megasphaera genomosp. type_1 str. 28L RepID=D3LU19_9FIRM (db=UNIREF evalue=2.0e-45 bit_score=184.0 identity=51.7 coverage=96.6850828729282)
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=154 to=162 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=176 evalue=8.6e-90 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD62_102_18

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9457..9801
DNA (345bp) protein (115aa)
rplR; 50S ribosomal protein L18
seg (db=Seg db_id=seg from=9 to=20)
L18_bact: ribosomal protein L18 (db=HMMTigr db_id=TIGR00060 from=5 to=114 evalue=1.8e-46 interpro_id=IPR004389 interpro_description=Ribosomal protein L18, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translational machinery components (db=superfamily db_id=SSF53137 from=22 to=114 evalue=1.2e-32)
ACD62_102_19

Not on your lists


9886..10518
DNA (633bp) protein (211aa)
30S ribosomal protein S5
30S ribosomal protein S5 n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=RS5_PELCD (db=UNIREF evalue=7.0e-47 bit_score=190.0 identity=69.54 coverage=71.0900473933649)
seg (db=Seg db_id=seg from=27 to=49)
seg (db=Seg db_id=seg from=87 to=102)
ACD62_102_20

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10518..10709
DNA (192bp) protein (64aa)
50S ribosomal protein L30 n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2M3_SPHTD (db=UNIREF evalue=2.0e-10 bit_score=68.2 identity=61.22 coverage=75.0)
50S ribosomal protein L30
seg (db=Seg db_id=seg from=7 to=12)
Ribosomal protein L30p (db=HMMPIR db_id=PIRSF002211 from=5 to=63 evalue=5.4e-25 interpro_id=IPR005996 interpro_description=Ribosomal protein L30, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACD62_102_21

Not on your lists


10819..11262
DNA (444bp) protein (148aa)
50S ribosomal protein L15
50S ribosomal protein L15 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=RL15_DESAA (db=UNIREF evalue=4.0e-39 bit_score=163.0 identity=58.74 coverage=95.9459459459459)
RIBOSOMAL_L15 (db=PatternScan db_id=PS00475 from=110 to=140 evalue=0.0 interpro_id=IPR001196 interpro_description=Ribosomal protein L15, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplO_bact: ribosomal protein L15 (db=HMMTigr db_id=TIGR01071 from=2 to=144 evalue=1.7e-61 interpro_id=IPR005749 interpro_description=Ribosomal protein L15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACD62_102_22

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11302..12615
DNA (1314bp) protein (438aa)
secY; preprotein translocase subunit SecY
secY; preprotein translocase subunit SecY
Preprotein translocase subunit secY n=3 Tax=Geobacter RepID=A5GAW2_GEOUR (db=UNIREF evalue=6.0e-135 bit_score=484.0 identity=57.8 coverage=97.7168949771689)
transmembrane_regions (db=TMHMM db_id=tmhmm from=264 to=286)
ACD62_102_23

Not on your lists

12612..13253
DNA (642bp) protein (214aa)
adenylate kinase
Adenylate kinase n=3 Tax=Fusobacterium RepID=C3WFY5_FUSMR (db=UNIREF evalue=3.0e-65 bit_score=251.0 identity=54.93 coverage=99.0654205607477)
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=81 to=92 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
adk: adenylate kinases (db=HMMTigr db_id=TIGR01351 from=2 to=213 evalue=2.6e-105 interpro_id=IPR006259 interpro_description=Adenylate kinase, subfamily GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: phosphotransferase activity, phosphate group as acceptor (GO:0016776), Molecular Function: nucleotide kinase activity (GO:0019201))
ACD62_102_24

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13293..14003
DNA (711bp) protein (237aa)
Methionine aminopeptidase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RFR9_MOOTA (db=UNIREF evalue=2.0e-81 bit_score=305.0 identity=61.54 coverage=98.3122362869198)
map; methionine aminopeptidase Map (EC:3.4.11.18)
MAP_1 (db=PatternScan db_id=PS00680 from=153 to=171 evalue=0.0 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
met_pdase_I: methionine aminopeptidase, t (db=HMMTigr db_id=TIGR00500 from=1 to=236 evalue=2.7e-119 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
ACD62_102_25

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14025..14246
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=IF1_SYNFM (db=UNIREF evalue=5.0e-30 bit_score=133.0 identity=84.93 coverage=97.2972972972973)
translation initiation factor IF-1
infA: translation initiation factor IF-1 (db=HMMTigr db_id=TIGR00008 from=3 to=71 evalue=7.6e-44 interpro_id=IPR004368 interpro_description=Translation initiation factor IF-1 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=71 evalue=2.1e-30 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ACD62_102_26

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14391..14774
DNA (384bp) protein (128aa)
30S ribosomal protein S13
30S ribosomal protein S13 n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=RS13_RHORT (db=UNIREF evalue=9.0e-39 bit_score=162.0 identity=61.48 coverage=94.53125)
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=88 to=101 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=115 evalue=3.6e-71 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_102_27

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14853..15362
DNA (510bp) protein (170aa)
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=RS11_DESOH (db=UNIREF evalue=3.0e-36 bit_score=154.0 identity=69.37 coverage=64.7058823529412)
seg (db=Seg db_id=seg from=106 to=117)
seg (db=Seg db_id=seg from=2 to=58)
ACD62_102_28

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15529..16155
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QXJ3_9DELT (db=UNIREF evalue=6.0e-74 bit_score=280.0 identity=64.11 coverage=99.0430622009569)
30S ribosomal protein S4
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=96 to=120 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843))
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=208 evalue=1.8e-87 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACD62_102_29
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16270..17427
DNA (1158bp) protein (386aa)
rpoA; DNA-directed RNA polymerase subunit alpha
rpoA; DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXZ7_DESAC (db=UNIREF evalue=2.0e-98 bit_score=363.0 identity=53.85 coverage=87.0466321243523)
seg (db=Seg db_id=seg from=277 to=290)
ACD62_102_30

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17453..18022
DNA (570bp) protein (190aa)
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 n=1 Tax=Geobacter uraniireducens Rf4 RepID=RL17_GEOUR (db=UNIREF evalue=1.0e-27 bit_score=125.0 identity=54.84 coverage=64.7368421052632)
seg (db=Seg db_id=seg from=133 to=143)
seg (db=Seg db_id=seg from=60 to=73)
Displaying items 1-30 of 44 in total

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