| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| DNA-directed RNA polymerase subunit beta' n=2 Tax=Geobacter RepID=RPOC_GEOSF (db=UNIREF evalue=0.0 bit_score=1978.0 identity=68.86 coverage=97.9636363636364) | similarity |
UNIREF
DB: UNIREF |
68.86 | 97.96 | 1978 | 0.0 | gpi:GPICK_03300 |
| DNA-directed RNA polymerase subunit beta' | similarity |
KEGG
DB: KEGG |
69.2 | 999.99 | 1943 | 0.0 | gpi:GPICK_03300 |
| DNA-directed RNA polymerase subunit beta' | rbh |
KEGG
DB: KEGG |
69.2 | 999.99 | 1943 | 0.0 | gpi:GPICK_03300 |
| seg (db=Seg db_id=seg from=1356 to=1370) | iprscan |
interpro
DB: Seg |
null | null | null | null | gpi:GPICK_03300 |
| seg (db=Seg db_id=seg from=206 to=221) | iprscan |
interpro
DB: Seg |
null | null | null | null | gpi:GPICK_03300 |
| coiled-coil (db=Coil db_id=coil from=264 to=285 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | gpi:GPICK_03300 |
| rpoC_TIGR: DNA-directed RNA polymerase, bet (db=HMMTigr db_id=TIGR02386 from=18 to=1347 evalue=0.0 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 0.0 | gpi:GPICK_03300 |
| beta and beta-prime subunits of DNA dependent RNA-polymerase (db=superfamily db_id=SSF64484 from=13 to=1345 evalue=0.0) | iprscan |
interpro
DB: superfamily |
null | null | null | 0.0 | gpi:GPICK_03300 |
| DNA-DIRECTED RNA POLYMERASE (db=HMMPanther db_id=PTHR19376 from=14 to=1361 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | gpi:GPICK_03300 |
| DNA-DIRECTED RNA POLYMERASE BETA CHAIN (db=HMMPanther db_id=PTHR19376:SF4 from=14 to=1361 evalue=0.0) | iprscan |
interpro
DB: HMMPanther |
null | null | null | 0.0 | gpi:GPICK_03300 |
| no description (db=HMMSmart db_id=SM00663 from=234 to=513 evalue=1.9e-175 interpro_id=IPR006592 interpro_description=RNA polymerase, N-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMSmart |
null | null | null | 1.90e-175 | gpi:GPICK_03300 |
| no description (db=Gene3D db_id=G3DSA:3.90.1120.10 from=12 to=344 evalue=7.6e-119 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 7.60e-119 | gpi:GPICK_03300 |
| RNA_pol_Rpb1_1 (db=HMMPfam db_id=PF04997 from=17 to=341 evalue=7.1e-95 interpro_id=IPR007080 interpro_description=RNA polymerase Rpb1, domain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 7.10e-95 | gpi:GPICK_03300 |
| RNA_pol_Rpb1_5 (db=HMMPfam db_id=PF04998 from=752 to=1300 evalue=2.9e-77 interpro_id=IPR007081 interpro_description=RNA polymerase Rpb1, domain 5 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.90e-77 | gpi:GPICK_03300 |
| RNA_pol_Rpb1_2 (db=HMMPfam db_id=PF00623 from=343 to=485 evalue=8.9e-50 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 8.90e-50 | gpi:GPICK_03300 |
| no description (db=Gene3D db_id=G3DSA:2.40.40.30 from=345 to=487 evalue=1.2e-31 interpro_id=IPR000722 interpro_description=RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.20e-31 | gpi:GPICK_03300 |
| RNA_pol_Rpb1_3 (db=HMMPfam db_id=PF04983 from=488 to=630 evalue=4.0e-31 interpro_id=IPR007066 interpro_description=RNA polymerase Rpb1, domain 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.00e-31 | gpi:GPICK_03300 |
| RNA_pol_Rpb1_4 (db=HMMPfam db_id=PF05000 from=660 to=749 evalue=9.2e-17 interpro_id=IPR007083 interpro_description=RNA polymerase Rpb1, domain 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 9.20e-17 | gpi:GPICK_03300 |
| RNApol_bact_RpoC (db=HAMAP db_id=MF_01322 from=14 to=1355 evalue=10.414 interpro_id=IPR012754 interpro_description=DNA-directed RNA polymerase, subunit beta-prime GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 1.04e+01 | gpi:GPICK_03300 |
| DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase |
UNIPROT
DB: UniProtKB |
100.0 | 999.99 | 2703 | 0.0 | K1ZRG9_9BACT | |
| DNA-directed RNA polymerase subunit beta' n=2 Tax=Geobacter RepID=RPOC_GEOSF | similarity |
UNIREF
DB: UNIREF90 |
68.1 | null | 1931 | 0.0 | gpi:GPICK_03300 |
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