Alias: ACD62_22440.16096.15
name | lists | location/seqs | annotations | notes |
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ACD62_263_1
uncultured bacterium, Bacteria
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Not on your lists |
193..348
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seg (db=Seg db_id=seg from=21 to=42)
Ribosomal_L33 (db=HMMPfam db_id=PF00471 from=5 to=48 evalue=5.3e-14 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=3 to=51 evalue=2.2e-10 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L33 (db=HAMAP db_id=MF_00294 from=1 to=51 evalue=13.625 interpro_id=IPR001705 interpro_description=Ribosomal protein L33 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD62_263_2
uncultured bacterium, Bacteria
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Not on your lists |
768..1139
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transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=60)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
SecE (db=HMMPfam db_id=PF00584 from=67 to=122 evalue=7.4e-13 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
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ACD62_263_3
uncultured bacterium, Bacteria
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Not on your lists |
1167..1697
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NusG antitermination factor
NUSG (db=PatternScan db_id=PS01014 from=159 to=168 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=5 to=176 evalue=2.0e-94 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00738 from=2 to=110 evalue=1.0e-42 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
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ACD62_263_4
uncultured bacterium, Bacteria
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Not on your lists |
1788..2213
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50S ribosomal protein L11
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=3 to=141 evalue=4.5e-80 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=HMMSmart db_id=SM00649 from=9 to=140 evalue=3.8e-76 interpro_id=IPR000911 interpro_description=Ribosomal protein L11 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S ROBOSOMAL PROTEIN L11 (db=HMMPanther db_id=PTHR11661:SF1 from=1 to=140 evalue=9.9e-57)
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ACD62_263_5
uncultured bacterium, Bacteria
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Not on your lists |
2221..2922
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rplA; 50S ribosomal protein L1
50S ribosomal protein L1 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXF0_DESAC (db=UNIREF evalue=1.0e-69 bit_score=266.0 identity=65.05 coverage=87.6068376068376)
seg (db=Seg db_id=seg from=2 to=14)
seg (db=Seg db_id=seg from=79 to=91)
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ACD62_263_6
uncultured bacterium, Bacteria
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Not on your lists |
3142..3666
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50S ribosomal protein L10 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5W4_MAGSM (db=UNIREF evalue=4.0e-38 bit_score=160.0 identity=47.4 coverage=97.7142857142857)
50S ribosomal protein L10
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=1 to=99 evalue=1.2e-26 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
Q30KS2_CANFA_Q30KS2; (db=BlastProDom db_id=PD968187 from=10 to=142 evalue=0.008)
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ACD62_263_7
uncultured bacterium, Bacteria
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Not on your lists |
3685..4113
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rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 n=5 Tax=Legionella pneumophila RepID=RL7_LEGPA (db=UNIREF evalue=1.0e-25 bit_score=118.0 identity=61.11 coverage=86.7132867132867)
seg (db=Seg db_id=seg from=49 to=70)
L12: ribosomal protein L7/L12 (db=HMMTigr db_id=TIGR00855 from=20 to=142 evalue=1.3e-60 interpro_id=IPR000206 interpro_description=Ribosomal protein L7/L12 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD62_263_8
uncultured bacterium, Bacteria
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Not on your lists |
4308..8411
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DNA-directed RNA polymerase subunit beta n=2 Tax=Geobacter RepID=RPOB_GEOMG (db=UNIREF evalue=0.0 bit_score=1894.0 identity=66.03 coverage=99.7076023391813)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
coiled-coil (db=Coil db_id=coil from=1347 to=1368 evalue=NA)
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ACD62_263_9
uncultured bacterium, Bacteria
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Not on your lists |
8538..12662
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DNA-directed RNA polymerase subunit beta' n=2 Tax=Geobacter RepID=RPOC_GEOSF (db=UNIREF evalue=0.0 bit_score=1978.0 identity=68.86 coverage=97.9636363636364)
DNA-directed RNA polymerase subunit beta'
DNA-directed RNA polymerase subunit beta'
seg (db=Seg db_id=seg from=1356 to=1370)
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ACD62_263_10
uncultured bacterium, Bacteria
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Not on your lists |
12948..13319
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30S ribosomal protein S12
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=43 to=50 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsL_bact: ribosomal protein S12 (db=HMMTigr db_id=TIGR00981 from=1 to=123 evalue=4.6e-89 interpro_id=IPR005679 interpro_description=Ribosomal protein S12, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER (db=HMMPanther db_id=PTHR11652 from=1 to=123 evalue=1.2e-74 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD62_263_11
uncultured bacterium, Bacteria
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Not on your lists |
13411..13881
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30S ribosomal protein S7
rpsG_bact: ribosomal protein S7 (db=HMMTigr db_id=TIGR01029 from=3 to=156 evalue=5.9e-98 interpro_id=IPR005717 interpro_description=Ribosomal protein S7, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
RIBOSOMAL PROTEIN S7 (db=HMMPanther db_id=PTHR11205 from=1 to=156 evalue=1.3e-62 interpro_id=IPR000235 interpro_description=Ribosomal protein S7 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S7 (db=HMMPfam db_id=PF00177 from=1 to=149 evalue=3.5e-62 interpro_id=IPR000235 interpro_description=Ribosomal protein S7 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD62_263_12
uncultured bacterium, Bacteria
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Not on your lists |
13974..16091
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fusA; elongation factor G
fusA; elongation factor G
Elongation factor G 1 n=2 Tax=Geobacter RepID=EFG1_GEOMG (db=UNIREF evalue=0.0 bit_score=840.0 identity=62.3 coverage=97.0254957507082)
seg (db=Seg db_id=seg from=112 to=123)
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