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ar4r2_scaffold_1742_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_57_14_Partial_curated

partial RP 41 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 357..1418

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 319.0
  • Bit_score: 399
  • Evalue 3.60e-108
23S rRNA pseudouridine synthase D n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B59C4B similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 312.0
  • Bit_score: 397
  • Evalue 9.60e-108
  • rbh
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 317.0
  • Bit_score: 394
  • Evalue 3.00e-107
  • rbh

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Taxonomy

Lysobacter daejeonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGAAAAATACTCCCCAAATCATAGATGAAGATGAGCGCGACGACATGGCGCTTGACCTGAGCGAAGACCTGGATGGCAGCGAAGCTGAGGCTGTCGACAGCCTCAGCTCCACGACCGTACTTCCGCCGGAAGCCAAAGGTTTGCGCATGGATCAAGCCATTGCCCAGGCCTTTCCCGATTACTCGCGTTCACGCCTGACCACCTGGCTGAAAGAAGGCAAAATCAGCGTCAATGGCCAGACCTGCGTGCCGCAGCGCACCCCGGTCGAAGGCGGCGAAGTAGTCGAACTTTTGGTCGAACCGGAGCGCCAGACCGAAGCCGCGCCGGAAAATATCCCCCTGAACGTGGTCTATAGCGATGAGCACATCATCGTTATCAACAAACCCGCCGGGCTGGTGGTGCATCCGGGCGCAGGCAACGCCACCGGCACTTTGATGAACGCCCTGCTGTTCCATTTTCCGGAACTGCGCCTGCTGCCGCGTGCGGGCATTGTGCATCGTCTGGACAAGGACACCTCCGGCCTGCTGGTGATTGCGCGCACCCTTCCGGCGCATAAGGCTCTGATCGAAGCCCTGTCTGACCGCGACATGCACCGTGAATACATGGCCGTGGCGCAAGGCCTGCTGGTGGCCGGCGGCATGGTTGATCTGCCAATTGGCCGCCACCCCCGCGAGCGCACCCGCATGGCGGTGACCGAAAACGGACGCGAAGCGATTACCCACTACCGCGTGGCGGAAAAATTCCGCCAGCACACCCTGTTGCGCGTGCAACTGGAAACCGGGCGCACCCACCAGATTCGCGTGCATATGTCGCATCTCAAATTACCGCTGGTCGGTGACCCGGACTACGGTGGCCGTCTGCGCCTGCCCAAAGGCGCGTCCACGGAACTGGTCGAAACCCTGCGCGGCTTCAAGCGTCAGGCACTGCATGCGGCGCGTCTGGAGCTTGAGCATCCCGCCACGGGTGAATTGATGGCTTGGGAAGCGCCGATTCCAGAGGATATGCAAGCGCTGATTGAGTTGTTGCGTGAAGATTTGCGTTTGAATCCTGATAAAAACTAG
PROTEIN sequence
Length: 354
MKNTPQIIDEDERDDMALDLSEDLDGSEAEAVDSLSSTTVLPPEAKGLRMDQAIAQAFPDYSRSRLTTWLKEGKISVNGQTCVPQRTPVEGGEVVELLVEPERQTEAAPENIPLNVVYSDEHIIVINKPAGLVVHPGAGNATGTLMNALLFHFPELRLLPRAGIVHRLDKDTSGLLVIARTLPAHKALIEALSDRDMHREYMAVAQGLLVAGGMVDLPIGRHPRERTRMAVTENGREAITHYRVAEKFRQHTLLRVQLETGRTHQIRVHMSHLKLPLVGDPDYGGRLRLPKGASTELVETLRGFKRQALHAARLELEHPATGELMAWEAPIPEDMQALIELLREDLRLNPDKN*