ggKbase home page

ar4r2_scaffold_3455_7

Organism: ALUMROCK_MS4_Peregrinibacteria_34_52_curated

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 ASCG 8 / 38
Location: comp(5114..5581)

Top 3 Functional Annotations

Value Algorithm Source
rlmH; ribosomal RNA large subunit methyltransferase H (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 159.0
  • Bit_score: 135
  • Evalue 8.50e-30
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 159.0
  • Bit_score: 135
  • Evalue 4.20e-29
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1D9_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 159.0
  • Bit_score: 135
  • Evalue 3.00e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 468
ATGAATATTCAAATTATTGTCTTTGGGAAAACAGCAGAAAGTTTTTTTGAAGAATCTCAAAAGCATTATCTCAAAAGAATTTCTCCATTTGCAAAAGTGGAATGGAAAGAACTGAAAGCAGAAAAAATTGTAGAAAATAGATCTCCCGAACAAATTAAAGAAACAGAAGCAAAACGATTTTTTGAAAGCTATACTCAAAAAAATTTTCTTATTGCATGCGATGTACAAGGAGTACAAATGACCAGTGAAGCGTTTTCCGAAAAAATAGAAAAAATAAAACACGAATATTCTGGCATTACTTTTGTTATTGGCGGGGCATTGGGGTTGGGCGAAAGTATTTTAAAAAAAGCAAATCTAAAATTTTCCCTTTCCAAAAATACATTTCCTCATGATTTATTTCGCACCATGCTTTTGGAGCAAATATATCGGGGGTTTATGATTGCAGAAAATAGAGAATATCATAAATGA
PROTEIN sequence
Length: 156
MNIQIIVFGKTAESFFEESQKHYLKRISPFAKVEWKELKAEKIVENRSPEQIKETEAKRFFESYTQKNFLIACDVQGVQMTSEAFSEKIEKIKHEYSGITFVIGGALGLGESILKKANLKFSLSKNTFPHDLFRTMLLEQIYRGFMIAENREYHK*