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ar4r2_scaffold_3121

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_3121_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..971)
DNA (969bp) protein (323aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRT8_9GAMM rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
magnesium and cobalt transport protein CorA rbh
ar4r2_scaffold_3121_2
unknown

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comp(1031..1336)
DNA (306bp) protein (102aa)

This feature has no annotations

ar4r2_scaffold_3121_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1484..2392)
DNA (909bp) protein (303aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
truB; tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP1_9GAMM rbh
ar4r2_scaffold_3121_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2389..2793)
DNA (405bp) protein (135aa)
Ribosome-binding factor A n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP2_9GAMM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
rbfA; ribosome-binding factor A
ar4r2_scaffold_3121_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2797..5760)
DNA (2964bp) protein (988aa)
Translation initiation factor IF-2 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP3_9GAMM rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
translation initiation factor IF-2
ar4r2_scaffold_3121_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5782..7281)
DNA (1500bp) protein (500aa)
NusA antitermination factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP4_9GAMM rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
nusA; transcription elongation factor NusA rbh
ar4r2_scaffold_3121_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7278..7757)
DNA (480bp) protein (160aa)
Ribosome maturation factor RimP n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP5_9GAMM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_3121_trna_1
unknown

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comp(7826..7899)
DNA (74bp)
transferRNA Met
ar4r2_scaffold_3121_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7965..8258)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34039.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
hypothetical protein
ar4r2_scaffold_3121_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8255..9049)
DNA (795bp) protein (265aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
NADH dehydrogenase subunit N (EC:1.6.99.5) rbh
NADH-quinone oxidoreductase subunit N n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP7_9GAMM rbh
Displaying 10 items

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