ggKbase home page

ar4r2_scaffold_6852_9

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(3994..4467)

Top 3 Functional Annotations

Value Algorithm Source
TRCF domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQM1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 155.0
  • Bit_score: 279
  • Evalue 1.70e-72
TRCF domain protein {ECO:0000313|EMBL:EIJ33664.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 155.0
  • Bit_score: 279
  • Evalue 2.40e-72
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 155.0
  • Bit_score: 244
  • Evalue 1.30e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
AATGAGGTCAAAACCATCGCCAACGTGGAGGCGGAACTGGGCGCGATGTTGCCCGGTGTGACGGTGCGCCATGCCCACGGGCAGATGCGGGCGAACGAGCTGGAAGGCATTATGCGCGACTTTTACCACCAGCGTTTCCAGATTCTGATTGCCACCACCATCATTGAAAGCGGCATCGACGTGCCGACCGCCAACACGATTTTGATCAACCGTGCCGACAAGCTGGGGCTGGCGCAATTGCACCAGTTGCGCGGACGGGTCGGGCGTTCGCACCACCGCGCTTATGCGTATTTGATTGCGCCGCCGAAATCCGCGCTCACGCCGGATGCGGTCAAGCGGCTGGAAGCGATTGAATCGCTGGAAGATCTGGGGGTCGGCTTCACGCTGGCAACGCACGATCTGGAGATTCGCGGCGCGGGCGAATTGCTCGGAGAAGGGCAAAGCGGGCAGATTCAGGAGATCGGAGGGGTGTAG
PROTEIN sequence
Length: 158
NEVKTIANVEAELGAMLPGVTVRHAHGQMRANELEGIMRDFYHQRFQILIATTIIESGIDVPTANTILINRADKLGLAQLHQLRGRVGRSHHRAYAYLIAPPKSALTPDAVKRLEAIESLEDLGVGFTLATHDLEIRGAGELLGEGQSGQIQEIGGV*