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ALUMROCK_MS4_Thiotrichales-related_46_269_curated

ALUMROCK_MS4_Gammaproteobacteria_46_1
In projects: ALUMROCK_MS4  |  alumrock-genomes

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 381 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
ar4r2_scaffold_23367
Genus: Methylophaga (100%)
4 3120 bp 43.14 1.00 101.73
ar4r2_scaffold_31972
Species: Thiomicrospira crunogena (50%)
2 2258 bp 49.42 1.00 100.71
ar4r2_scaffold_7390
Class: Gammaproteobacteria (60%)
5 4374 bp 49.11 1.00 100.69
ar4r2_scaffold_3631
Species: Thiothrix nivea (70%)
10 9735 bp 43.46 1.00 100.46
ar4r2_scaffold_15970
Order: Thiotrichales (60%)
5 4358 bp 48.35 1.00 100.44
ar4r2_scaffold_11333
Species: Hydrogenovibrio marinus (55.56%)
9 7850 bp 48.11 1.00 100.36
ar4r2_scaffold_25702
Species: Thiomicrospira crunogena (50%)
2 1717 bp 48.86 1.00 100.29
ar4r2_scaffold_10427
Order: Thiotrichales (50%)
4 3134 bp 46.30 1.00 100.22
ar4r2_scaffold_10774
Class: Gammaproteobacteria (50%)
6 4447 bp 44.79 1.00 100.18
ar4r2_scaffold_28574
Species: Thiothrix nivea (100%)
2 1906 bp 51.00 1.00 100.11
ar4r2_scaffold_23954
Species: Thiothrix nivea (100%)
3 1760 bp 49.60 1.00 100.06
ar4r2_scaffold_8616
Species: Thioalkalimicrobium aerophilum (50%)
2 3667 bp 45.70 1.00 100.06
ar4r2_scaffold_6556
Class: Gammaproteobacteria (50%)
6 4963 bp 44.39 1.00 100.04
ar4r2_scaffold_30792
Species: Thioalkalimicrobium aerophilum (100%)
1 2154 bp 48.24 1.00 100.00
ar4r2_scaffold_11236
Phylum: Proteobacteria (66.67%)
3 4929 bp 40.01 1.00 100.00
ar4r2_scaffold_32830
Species: Thioalkalimicrobium aerophilum (100%)
1 1806 bp 47.40 1.00 100.00
ar4r2_scaffold_35443
Species: CG_Thiomicrospira_01 (100%)
1 2400 bp 47.54 1.00 100.00
ar4r2_scaffold_25278
Species: Thioalkalimicrobium cyclicum (100%)
1 1710 bp 48.19 1.00 100.00
ar4r2_scaffold_8328
Phylum: Proteobacteria (88.89%)
9 5722 bp 44.09 1.00 99.98
ar4r2_scaffold_45545
Species: Beggiatoa alba (100%)
1 2749 bp 44.42 1.00 99.96
ar4r2_scaffold_17949
Species: Thioalkalimicrobium aerophilum (100%)
1 2605 bp 47.56 1.00 99.96
ar4r2_scaffold_29463
Species: Thioalkalimicrobium aerophilum (66.67%)
3 1948 bp 48.31 1.00 99.95
ar4r2_scaffold_16501
Species: Thiomicrospira crunogena (100%)
1 3215 bp 49.61 1.00 99.94
ar4r2_scaffold_5052
Class: Gammaproteobacteria (60%)
5 6217 bp 48.74 1.00 99.94
ar4r2_scaffold_16878
Species: Thiothrix nivea (100%)
3 2426 bp 50.95 1.00 99.92
ar4r2_scaffold_32314
Species: Thioalkalimicrobium aerophilum (100%)
1 1829 bp 47.79 1.00 99.89
ar4r2_scaffold_27017
Species: Thioalkalimicrobium aerophilum (100%)
1 1676 bp 40.81 1.00 99.88
ar4r2_scaffold_10602
Domain: Bacteria (100%)
5 4540 bp 44.27 1.00 99.85
ar4r2_scaffold_12279
Genus: Thiomicrospira (50%)
4 3062 bp 48.86 1.00 99.84
ar4r2_scaffold_37444
Species: CG_Thiomicrospira_01 (100%)
1 2089 bp 45.57 1.00 99.81
ar4r2_scaffold_26956
Species: Sedimenticola sp. SIP-G1 (50%)
2 2223 bp 45.07 1.00 99.60
ar4r2_scaffold_10800
Phylum: Proteobacteria (50%)
10 9623 bp 47.33 1.00 99.57
ar4r2_scaffold_38732
Order: Thiotrichales (50%)
4 2508 bp 45.22 1.00 99.52
ar4r2_scaffold_5519
Species: Psychromonas ingrahamii (57.14%)
7 5725 bp 47.28 1.00 99.46
ar4r2_scaffold_14123
Order: Thiotrichales (50%)
4 4536 bp 49.27 1.00 99.34
ar4r2_scaffold_9033
Class: Gammaproteobacteria (50%)
4 5576 bp 48.76 1.00 99.32
ar4r2_scaffold_11275
Order: Thiotrichales (85.71%)
7 3419 bp 46.59 1.00 99.24
ar4r2_scaffold_9211
Class: Gammaproteobacteria (50%)
4 4184 bp 46.08 1.00 99.24
ar4r2_scaffold_9026
Phylum: Proteobacteria (66.67%)
3 3433 bp 46.87 1.00 99.18
ar4r2_scaffold_10091
Species: Thioalkalimicrobium cyclicum (50%)
2 3146 bp 47.43 1.00 99.08
ar4r2_scaffold_3767
Class: Gammaproteobacteria (83.33%)
6 7471 bp 45.80 1.00 99.06
ar4r2_scaffold_18669
Species: CG_Thiomicrospira_01 (50%)
2 2067 bp 47.36 1.00 98.98
ar4r2_scaffold_57050
Order: Thiotrichales (100%)
3 2860 bp 48.36 1.00 98.81
ar4r2_scaffold_31883
Species: Hydrogenovibrio marinus (66.67%)
3 2065 bp 48.86 1.00 98.79
ar4r2_scaffold_17067
Order: Thiotrichales (66.67%)
3 2797 bp 46.84 1.00 98.78
ar4r2_scaffold_26294
Genus: Thiomicrospira (50%)
4 3420 bp 49.09 1.00 98.77
ar4r2_scaffold_11409
Genus: Thiomonas (75%)
4 3667 bp 48.70 1.00 98.75
ar4r2_scaffold_5889
Class: Gammaproteobacteria (100%)
8 8628 bp 48.47 1.00 98.71
ar4r2_scaffold_4646
Domain: Bacteria (71.43%)
7 6391 bp 40.15 1.00 98.62
ar4r2_scaffold_26726
Species: Thiomicrospira crunogena (100%)
1 2002 bp 46.65 1.00 98.60
Displaying items 1-50 of 381 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.