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2013_60cm_scaffold_22_20

Organism: 2013_60CM_Gemmatimonadetes_65_52

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(15529..17457)

Top 3 Functional Annotations

Value Algorithm Source
Acyl-CoA dehydrogenase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNS1_9ACTO id=5225245 bin=16ft_combo_ws3_JS1 species=Micromonospora sp. ATCC 39149 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 633.0
  • Bit_score: 696
  • Evalue 2.40e-197
acyl-CoA dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 611.0
  • Bit_score: 642
  • Evalue 1.50e-181

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1929
ATGCCCGAGCAGTCCGCCGGACTCGCCTCCGCGCAGGAAGCACGCGACGTCGCCGAAGCGGCACGCGAGAGCGAATGGTCCGGACCGAGCTTCGTCCGCGAGCTCTTCCTCGGCCGCTTCCGCCTGGATCTCGTCCACCCGCATCCGCGGCACGAAGACGCGGACGAACAGGCGCGCGCGCAGGCGTTCTTCCCGAAGCTCCGTTCGTTCCTGGAGCGCGTGGATTCCGACATGATCGACCGCACGGGCGAGATCCCCGAAGAAGACGTGCAGGAGCTGCGCGACATCGGAGCGTTCGGCATCAAGATTCCGCAGGAGTACGGCGGGCTCGGGCTCTCTTACGCCAGCTATACGCGTGCAATGGCCATGGTGACGAGCAAGGACGGTTCGCTCACGGCACTCCTGTCTGCGAGTCAGTCCATCGGTCTCCCGCAACCGCTCAAGCTGTTCGGCACGCCGGAGCAGAAGCAGCGCTTCTTTCCCCGGCTCGCTCGCGGCGCCATTTCCGCGTTTGCGCTGACCGAGACGGACGCGGGATCGGACCCCGCGAACATGCGCACCACGGCGACGGCGAGCGAGGACGGCACCTACTGGACGCTGAATGGAACCAAGCTGTGGTGCACCAACGGCACGCGCGCGGAGCTGCTCGTCGTCATGGCGCGCACGCCCGACCAGGTCGTGAAGGGCAAGCCACGCAAACAGATAACGGCATTCATCGTCGAGGCCAACACGCCCGGCATCGAGATCGTTCATCGCTGCCGCTTCATGGGGCTCAAGGCCATCGAGAATGGCGTCATCCGCTTCAACAATGTGCGCGTCCCGAGCGAGAACATTCTCTGGGGCGAAGGGAAGGGGCTCAAGCTCGCGCTCGTGACGCTCAACACGGGACGCCTCACGCTGCCGGCGAGCAGCATGGGCGGCGCGAAGGCGGCGCTGGAGGCGTCGCGATGGTGGGCCGGCGAGCGTGTGCAATGGGGTCAGCCGATCGGCAAGCACGAAGCGGTCGCGCAGAAGCTCGCGCTCATGGCGGCGAACACCTTTGCGATGGAAAGCATCGCGGAGCTCACCGTCGCACTCAACGAGGGCGGCAAATACGACATCCGCCTCGAGGCGGCCGTCGCCAAGATGTGGAACACGGAAGCCGGATGGCGCATCATCGACGACGCGCTCCAGATCCGCGGGGGGCGTGGCTACGAGACTGCAGACTCGCTGCGCGCCCGCGGAGAAGTCCCGATTCCCATCGAGCGCGCCATGCGCGATTTCCGCATCAATCTCATCTTCGAAGGCACGTCCGAGGTGATGCGGCTGTTCATCGCGCGTGAGGCGGTTGATCACCACTTCAAGACGGCCTTCGCATTGGTCGACAAGCATGCGTCCGGAGCGGAAAAAGCAGCCGCGCTGGGGCGCGCGGTCCGCTTCTATCCCGCGTGGTACGCGTCGCGATGGTTCGGCAAGGGAAGCGTACCGGGTGCATTCAGCGACTTCGGATCACTCGCGCATCATCTGCGTTGGGCGGAACGTGCAACGCGCCGGCTTGGACGCGCGCTCTTTCACGCGATGGCGCGCTTCGGGCCCGGCCTCGAGCGGCGACAGATGGTGCTGTTCCGCGCGGTCGACATCGGCGCGGACCTGTTCGCAATGACAGCCGTTTGCGTCCGCGCGAGCATGCTCGCGAGAGACGGCAATCACGAGGCCACCGAGCTCGCTGACCTGTTCTGCCGCGAAGCGCGCGACCGCATTGGCCAGCGGTTCGATGCGTTTTACGGCGCGCACGACAAGGCGACGTACCGCGTGGCACAGCGCGTCCTTGCGGGCGAGCACGAATGGCTGGAGCAGGGCATCGTGGGGCTGATGCCCCACGCGTCGACGAACGTCTCCGGCTTGCCGGACGCGGTGCTATCCCCGCTTGCTGCCTCGAGCGTGCGCTAG
PROTEIN sequence
Length: 643
MPEQSAGLASAQEARDVAEAARESEWSGPSFVRELFLGRFRLDLVHPHPRHEDADEQARAQAFFPKLRSFLERVDSDMIDRTGEIPEEDVQELRDIGAFGIKIPQEYGGLGLSYASYTRAMAMVTSKDGSLTALLSASQSIGLPQPLKLFGTPEQKQRFFPRLARGAISAFALTETDAGSDPANMRTTATASEDGTYWTLNGTKLWCTNGTRAELLVVMARTPDQVVKGKPRKQITAFIVEANTPGIEIVHRCRFMGLKAIENGVIRFNNVRVPSENILWGEGKGLKLALVTLNTGRLTLPASSMGGAKAALEASRWWAGERVQWGQPIGKHEAVAQKLALMAANTFAMESIAELTVALNEGGKYDIRLEAAVAKMWNTEAGWRIIDDALQIRGGRGYETADSLRARGEVPIPIERAMRDFRINLIFEGTSEVMRLFIAREAVDHHFKTAFALVDKHASGAEKAAALGRAVRFYPAWYASRWFGKGSVPGAFSDFGSLAHHLRWAERATRRLGRALFHAMARFGPGLERRQMVLFRAVDIGADLFAMTAVCVRASMLARDGNHEATELADLFCREARDRIGQRFDAFYGAHDKATYRVAQRVLAGEHEWLEQGIVGLMPHASTNVSGLPDAVLSPLAASSVR*