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gwa2_scaffold_525

Alias: zPERA2_38_36_8

Search features with annotation key words

Displaying items 61-89 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_525_61
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists


comp(63722..64972)
DNA (1251bp) protein (417aa)
Prolyl-tRNA synthetase n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PY27_9BACT rbh
Prolyl-tRNA synthetase Tax=zPERA2_38_36
prolyl-tRNA synthetase
no description (db=Gene3D db_id=G3DSA:3.40.50.800 from=316 to=416 evalue=1.2e-20 interpro_id=IPR004154 interpro_description=Anticodon-binding)
gwa2_scaffold_525_62
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(64974..67136)
DNA (2163bp) protein (721aa)
Translation initiation factor IF-2 n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQX0_9CLOT rbh
Translation initiation factor IF-2, translation initiation factor IF-2 {ECO:0000313|EMBL:KKR05158.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_G
initiation factor 2
seg (db=Seg db_id=seg from=51 to=88)
gwa2_scaffold_525_63
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(67221..68309)
DNA (1089bp) protein (363aa)
Putative DNA recombination protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR05159.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
seg (db=Seg db_id=seg from=3 to=18)
gwa2_scaffold_525_64
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

68420..69118
DNA (699bp) protein (233aa)
Tax=zPERA2_38_36
gwa2_scaffold_525_65
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(69502..72324)
DNA (2823bp) protein (941aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLR2_9BACT rbh
Uncharacterized protein Tax=zPERA2_38_36
hypothetical protein
coiled-coil (db=Coil db_id=coil from=159 to=191 evalue=NA)
gwa2_scaffold_525_66
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists


comp(72401..73582)
DNA (1182bp) protein (394aa)
30S ribosomal protein S1 n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD5_9BACT
30S ribosomal protein S1 Tax=zPERA2_38_36
30S ribosomal protein S1
coiled-coil (db=Coil db_id=coil from=370 to=391 evalue=NA)
gwa2_scaffold_525_67
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

73874..74773
DNA (900bp) protein (300aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05163.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
gwa2_scaffold_525_68
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(74792..77509)
DNA (2718bp) protein (906aa)
ATPase AAA-2 domain protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8D094_HALOH rbh
ATPase AAA-2 domain-containing protein, ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:KKR05164.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacter
ATPase AAA
coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
gwa2_scaffold_525_69
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(77689..78564)
DNA (876bp) protein (292aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05165.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
gwa2_scaffold_525_70
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(78525..79589)
DNA (1065bp) protein (355aa)
Holliday junction DNA helicase subunit RuvB, holliday junction DNA helicase RuvB {ECO:0000313|EMBL:KKR05166.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KKR05166.1};; TaxID=1619062 species="Bacteria; Peregriniba
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Clostridiales RepID=G8LYY5_CLOCD rbh
Holliday junction DNA helicase subunit RuvB
seg (db=Seg db_id=seg from=298 to=310)
gwa2_scaffold_525_71
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(79597..80076)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05167.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
seg (db=Seg db_id=seg from=52 to=70)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=41)
gwa2_scaffold_525_72
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(80094..80954)
DNA (861bp) protein (287aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05168.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=100 to=233 evalue=3.7e-06)
gwa2_scaffold_525_73
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

81056..84538
DNA (3483bp) protein (1161aa)
seg Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=1125 to=1146 evalue=NA)
seg (db=Seg db_id=seg from=1032 to=1046)
gwa2_scaffold_525_74
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

84597..85352
DNA (756bp) protein (252aa)
Tax=zPERA2_38_36
gwa2_scaffold_525_75
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

85470..85955
DNA (486bp) protein (162aa)
seg Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
seg (db=Seg db_id=seg from=111 to=123)
gwa2_scaffold_525_76
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(86303..88267)
DNA (1965bp) protein (655aa)
Cellulosome-anchoring protein n=1 Tax=sediment metagenome RepID=D9PNH4_9ZZZZ
Ig domain-containing protein {ECO:0000313|EMBL:KKR05172.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
s-layer domain-containing protein
seg (db=Seg db_id=seg from=29 to=44)
gwa2_scaffold_525_77
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

88312..89346
DNA (1035bp) protein (345aa)
ATP/GTP hydrolase n=1 Tax=human gut metagenome RepID=K1SLF5_9ZZZZ
ATP/GTP hydrolase {ECO:0000313|EMBL:KKQ70909.1}; TaxID=1619055 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_38_36.;"
ATP/GTP hydrolase
(db=HMMPfam db_id=PF01966 from=162 to=293 evalue=0.00015 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain GO=Molecular Function: phosphoric diester hydrolase activity (GO:0008081), Molecular Function: metal ion binding (GO:0046872))
gwa2_scaffold_525_78
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(89326..89796)
DNA (471bp) protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05175.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
coiled-coil (db=Coil db_id=coil from=37 to=65 evalue=NA)
gwa2_scaffold_525_79
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(89854..91380)
DNA (1527bp) protein (509aa)
SpoIID/LytB domain protein n=7 Tax=Thermoanaerobacter RepID=E1FDR7_9THEO
SpoIID/LytB domain-containing protein {ECO:0000313|EMBL:KKR05176.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
SpoIID/LytB domain-containing protein
seg (db=Seg db_id=seg from=368 to=379)
gwa2_scaffold_525_80
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

91602..92084
DNA (483bp) protein (161aa)
seg Tax=zPERA2_38_36
seg (db=Seg db_id=seg from=79 to=84)
gwa2_scaffold_525_81
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(92133..94607)
DNA (2475bp) protein (825aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT rbh
ATPase {ECO:0000313|EMBL:KKR05178.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
seg (db=Seg db_id=seg from=24 to=35)
gwa2_scaffold_525_82
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(94728..96104)
DNA (1377bp) protein (459aa)
coiled-coil Tax=zPERA2_38_36
coiled-coil (db=Coil db_id=coil from=31 to=66 evalue=NA)
gwa2_scaffold_525_83
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(96268..96516)
DNA (249bp) protein (83aa)
Tax=zPERA2_38_36
gwa2_scaffold_525_84
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(96530..97408)
DNA (879bp) protein (293aa)
Tax=zPERA2_38_36
gwa2_scaffold_525_85
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists


comp(97494..99290)
DNA (1797bp) protein (599aa)
Aspartate--tRNA ligase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C339_SPHTD rbh
Aspartate--tRNA ligase Tax=zPERA2_38_36
aspartyl-tRNA synthetase
seg (db=Seg db_id=seg from=55 to=65)
gwa2_scaffold_525_86
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

comp(99294..102809)
DNA (3516bp) protein (1172aa)
DNA polymerase III alpha subunit n=1 Tax=Thermoanaerobacter tengcongensis MB4 RepID=Q8R912_THETN rbh
DNA polymerase III alpha subunit Tax=zPERA2_38_36
DNA polymerase III subunit alpha
polc: DNA polymerase III, alpha subunit (db=HMMTigr db_id=TIGR00594 from=3 to=1021 evalue=0.0 interpro_id=IPR004805 interpro_description=DNA polymerase III, alpha subunit GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408))
gwa2_scaffold_525_87
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

103370..104431
DNA (1062bp) protein (354aa)
RNA polymerase sigma factor n=1 Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E1B6_9GAMM
RNA polymerase sigma factor Tax=zPERA2_38_36
hypothetical protein
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=5 to=91 evalue=1.7e-15 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
gwa2_scaffold_525_88
zPERA2_38_36, Peregrinibacteria, Bacteria

Not on your lists

104450..104791
DNA (342bp) protein (114aa)
Histidine triad (HIT) protein n=1 Tax=Thermocrinis albus DSM 14484 RepID=D3SPZ2_THEAH
Histidine triad (HIT) protein Tax=zPERA2_38_36
HIT family protein
HIT_1 (db=PatternScan db_id=PS00892 from=92 to=110 evalue=0.0 interpro_id=IPR019808 interpro_description=Histidine triad, conserved site)
gwa2_scaffold_525_89
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

Not on your lists

comp(104801..105067)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR05186.1}; Flags: Fragment;; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
Displaying items 61-89 of 89 in total

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