Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA polymerase, sigma 70 subunit, RpoD subfamily protein n=1 Tax=Alteromonas sp. S89 RepID=UPI000255B9B5 | similarity |
UNIREF
DB: UNIREF90 |
28.0 | 0.0 | 79 | 2.00e+00 | |
RNA polymerase, sigma 70 subunit, RpoD subfamily protein Tax=zPERA2_38_36 |
UNIPROT
DB: UniProtKB |
100.0 | 570.0 | 1139 | 0.0 | ggdbv1_1379842 | |
seg (db=Seg db_id=seg from=168 to=186) | iprscan |
interpro
DB: Seg |
0.0 | 0.0 | 0 | 0.0 | |
SIGMA70FCT (db=FPrintScan db_id=PR00046 from=271 to=284 evalue=1.2e-05 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
0.0 | 0.0 | 0 | 1.00e+00 | |
no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=222 to=315 evalue=1.2e-14) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 1.00e+00 | |
(db=HMMPfam db_id=PF04542 from=245 to=314 evalue=2.3e-08 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 2.00e+00 | |
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=240 to=502 evalue=3.2e-05 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 3.00e+00 | |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=222 to=313 evalue=4.6e-18 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fac | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 4.00e+00 |