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S12_scaffold_62_curated_14

Organism: S12_Novosphingobium_64_29_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(12176..12733)

Top 3 Functional Annotations

Value Algorithm Source
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440, ECO:0000256|SAAS:SAAS00059151};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 185.0
  • Bit_score: 316
  • Evalue 2.10e-83
chemotaxis protein CheD (EC:3.5.1.44) similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 182.0
  • Bit_score: 216
  • Evalue 3.50e-54
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7Q7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 172.0
  • Bit_score: 276
  • Evalue 1.70e-71

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Taxonomy

Novosphingobium subterraneum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCCCCATCCCGACGAGATCAGCGCCACGCCGCCAACCGAACGCATCACCGTGATGCAGGGACAGGCCATCGCATCCAGCAACCCGGCCACGGAGTTTTCCACCGTGCTCGGATCATGCGTGGCGACCTGCCTCTATGATCCGGCAGCGCATATCGGCGGCATGAACCACTTCCTGCTGTCCGAACCGCCCGCCAACGCCCCCGGCACCCAGATCGACGAACACTACGGCGTCTATCTTATGGAACTGCTGGTGAACGAGATGCTGGCCAGGGGCGCACGCAAGGCCAACCTCAAGGCGCACCTTTATGGCGGCGCCAACGTCAACCGCAACATGATGCGAATCGGCAGCATGAACGCCGATTTCGCCCGTGTTTTCCTGCGCCGTGAAGGGATTGCCCTGATGCGCGAGGATCTTGGCGGCACGTGCGCCCGCCGCGTCGATTTCCGCCCCGCGTCGGGCCAGGTCCGCTGCCGTTCGGTGGAAGACCGCTTTGCCCCGCCCGTTCAACCCACCCCGCGCCCGACGCTCGCCCTTGGCGACGTCGAACTGTTCTGA
PROTEIN sequence
Length: 186
MPHPDEISATPPTERITVMQGQAIASSNPATEFSTVLGSCVATCLYDPAAHIGGMNHFLLSEPPANAPGTQIDEHYGVYLMELLVNEMLARGARKANLKAHLYGGANVNRNMMRIGSMNADFARVFLRREGIALMREDLGGTCARRVDFRPASGQVRCRSVEDRFAPPVQPTPRPTLALGDVELF*