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S12_scaffold_389_curated_18

Organism: S12_Novosphingobium_64_29_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 15750..16433

Top 3 Functional Annotations

Value Algorithm Source
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 222.0
  • Bit_score: 321
  • Evalue 6.10e-85
uracil-DNA glycosylase (EC:3.2.2.-) similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 223.0
  • Bit_score: 319
  • Evalue 6.10e-85
  • rbh
Uracil-DNA glycosylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G382_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 223.0
  • Bit_score: 319
  • Evalue 2.10e-84
  • rbh

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGACACTGCTACCGATCCCGCCCGCGTGGCAAGAGCTGCTTGCCCCCGCCATTGCCCAGCCGGACATGGCCCGGCTGGGCGCGTTTCTGCATGATCGGGAACAGGCCGGGGCGGTAATCTACCCCCCCCGCGCCGAACGGCTGGCTGCGCTGGACCTGACCGCCCCGGAGGCGGTGCGCGTGGTGATTCTGGGGCAAGACCCCTATCACGGACCGGGGCAGGCGCATGGCCTGGCGTTTTCCGTGCGCGACGGCGTGAAGATCCCGCCAAGCCTTGCCAACATCTTCAAGGAACTGCACGCCGACCTTGGCCTTGCCCGCCCGGCCAGTGGCGACCTTTCGGCTTGGGCGCGGCAAGGGGTGCTGTTGCTCAACACCGTGCTGACCGTAGAGGCAGGGCAGGCCGGATCGCATCAGGGCCACGGTTGGGAAGCCTTCACCGATGCAGTCGTCACTGCCATCGCCGCGCAGGAGAAGCCCACCGTCTTCCTGCTGTGGGGCAACCATGCGCAGAAGAAGGCCGCACGCATCGCCGCGCTTGAACGCGGTGTGCATCTGGTGCTGAAAGCGCCACACCCCAGCCCGCTGTCGGCCTATGCCGGCTTTTTCGGCTGCGGCCATTTCGGCAAGGCCAACGCCTTCCTTGCGGCGCACGGTCGCGGCACGGTTGACTGGCAGACATAG
PROTEIN sequence
Length: 228
MTLLPIPPAWQELLAPAIAQPDMARLGAFLHDREQAGAVIYPPRAERLAALDLTAPEAVRVVILGQDPYHGPGQAHGLAFSVRDGVKIPPSLANIFKELHADLGLARPASGDLSAWARQGVLLLNTVLTVEAGQAGSHQGHGWEAFTDAVVTAIAAQEKPTVFLLWGNHAQKKAARIAALERGVHLVLKAPHPSPLSAYAGFFGCGHFGKANAFLAAHGRGTVDWQT*