ggKbase home page

S12_scaffold_160_curated_21

Organism: S12_Novosphingobium_64_29_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(17702..18583)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AB39 similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 286.0
  • Bit_score: 293
  • Evalue 2.10e-76
AraC family transcriptional regulator {ECO:0000313|EMBL:AJR25445.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 284.0
  • Bit_score: 278
  • Evalue 9.90e-72
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 298.0
  • Bit_score: 126
  • Evalue 7.50e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGCCAATCCGGCCCGAAAGCGACTGGTCGGACCTCAATGCGGACTTCGTGGCGGATTTTGAAATCCTCGCGCGGTTCGCCGCCCACGACCTGACCCTGGATGTCAGGACATACGACTGGGTCCGTCCGACCGCCGGGCAACTGCTGCCCCGGCGCCACTATCTCGATATCTCGCTCAACGGGGCGATGCGGCGCAGCATCCTGCGTTCGGAACGCTGGGCCGAACCGCAATATTCGGGCAGCGTGCTCTACCTGCCGCCCAACGCCGTATACTGGGGCCAGCCCGCGCTCGAACGGCGCAAGCTGCTGTGCATGTCGTTTGGCGACACGTTCCTTGAAAATGTCTTCGAGGATGCCAACCCGTTGCATCGCGCCATCCCGCACGCCGATATCCAGAATACCGCACTGCGCCGTCATCTTCTGGCCATGGCGGGGGAACTGGCCGCGCCCGGCTTTGCCGCCGGGCCGTTGCTCGAAGCCATGGCGATCTCCGCGACGGTCGAGCTGGCGCGCTGGTCGCAACTGATCGACGACCCGTCAAACGGAACGGTCCTGCCGCACCAGGCGCGGCGGATCGAGGAATATATCCGCGAGAACCTGTCCAGCGCGCTGAGCATTTCGGACATCGGCCGCGCCTGCGGGATGAGCACGCGCAACGTGGCGCGGGTGTTCAAGCAGGCCACCGGGGTCAGCATCGGCGATTTCATCGCGCGCTGCCGGATCGATCTGGCCAAGGATCTGCTGGCATCGGACGAACTGCGGATAAAGGAAGTAAGCTGGCGCTGCGGTTTCCGCAGTTCGTCGGCCTTTTCCGCAGCATTCCGCGCCGCAACGGGGATGACCCCGCGCGATTACCGCATGCGGCCGGGCATGCTGCAATAA
PROTEIN sequence
Length: 294
MPIRPESDWSDLNADFVADFEILARFAAHDLTLDVRTYDWVRPTAGQLLPRRHYLDISLNGAMRRSILRSERWAEPQYSGSVLYLPPNAVYWGQPALERRKLLCMSFGDTFLENVFEDANPLHRAIPHADIQNTALRRHLLAMAGELAAPGFAAGPLLEAMAISATVELARWSQLIDDPSNGTVLPHQARRIEEYIRENLSSALSISDIGRACGMSTRNVARVFKQATGVSIGDFIARCRIDLAKDLLASDELRIKEVSWRCGFRSSSAFSAAFRAATGMTPRDYRMRPGMLQ*