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S12_scaffold_222_curated_24

Organism: S12_Starkeya_67_31_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(27851..28654)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=3 Tax=Pseudomonas RepID=J2RBX9_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 69.7
  • Coverage: 267.0
  • Bit_score: 392
  • Evalue 2.30e-106
  • rbh
Nitrate transport permease nrtB {ECO:0000313|EMBL:KIF57044.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 267.0
  • Bit_score: 395
  • Evalue 5.10e-107
binding-protein dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 267.0
  • Bit_score: 392
  • Evalue 6.60e-107
  • rbh

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGGCCCGCAAGCGTTCCGTCATCGACCTCTGCCTCACGCCGAAGACCGAGGTCCCGGCCACCCTGCGCTACCTCGTCTCGACGCTGACCTGGGTCGCGGTCATCGCGCTCTGGTCGCTGGCGACCTATGGTGGCTTCATGCAGGAGATCTTCCTGCCCTCGCCGACGGCGGTGATGAAGGCGTTCTTCCGCCTGTTCGAGGACGGCACGCTCGCCCAGCACATCTGGGCCAGCCTGCAGGTGGTGGTCATCGGCTTCCTCATCTCCTCGCTGATCGCCGTGCCGCTCGGCCTGCTGATGGGCACGTTCCGCGTGGTGCAGGCGGGGCTGGAGCCGCTGGTGAACTTCATCCGCTATCTGCCGGTGACCTCCTTCGTGCCGCTGTTCATCCTGTGGATCGGCATCGGCATCGAACAGCGCATCATGGTCATCTTCTTCGGCACCTTCTTCCAGCAGCTGGTGATGATCGCCGACGTGTCGCGTGGCGTCTCCAAGGACCTGCTCAACGCCTCCTACACGCTCGGCGCCTCGCGCCGCGACGCGCTGCTGCACGTGCTCACGCCGGCCTCTCTGCCGGGCATCGTCGACACGCTGCGCATCACCATGGGCTGGGCCTGGACCTATCTCGTGGTTGCCGAGCTGGTCGCGGCGTCCTCGGGCCTCGGCTACATCTCGATGAAGGCGATGCGCGGCTTCCAGGTCGACGTCATCTTCCTCGCCATCGCCGTCATCGGCCTGCTCGGCCTGTTCACCGACACGGTGTTCCGGCTCATCCGCCTGCGGCTCGTGCCGTGGGCGAACTGA
PROTEIN sequence
Length: 268
MARKRSVIDLCLTPKTEVPATLRYLVSTLTWVAVIALWSLATYGGFMQEIFLPSPTAVMKAFFRLFEDGTLAQHIWASLQVVVIGFLISSLIAVPLGLLMGTFRVVQAGLEPLVNFIRYLPVTSFVPLFILWIGIGIEQRIMVIFFGTFFQQLVMIADVSRGVSKDLLNASYTLGASRRDALLHVLTPASLPGIVDTLRITMGWAWTYLVVAELVAASSGLGYISMKAMRGFQVDVIFLAIAVIGLLGLFTDTVFRLIRLRLVPWAN*