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S13_scaffold_352_curated_9

Organism: S13_RifCSP_Burkholderiales_66_15_curated

near complete RP 50 / 55 MC: 3 BSCG 50 / 51 ASCG 11 / 38
Location: comp(8102..8752)

Top 3 Functional Annotations

Value Algorithm Source
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; K11719 lipopolysaccharide export system protein LptC id=5083677 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 216.0
  • Bit_score: 419
  • Evalue 1.10e-114
  • rbh
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 216.0
  • Bit_score: 194
  • Evalue 1.60e-47
Tax=GWE1_Burkholderiales_65_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 216.0
  • Bit_score: 418
  • Evalue 4.50e-114

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Taxonomy

GWE1_Burkholderiales_65_30_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
GTGAACGCGCCCGCACCACCCACCGATCCCCAGGCGAAGAAGCGCCGCAGGGGTCTGAGCCGGGTCTGGGACCAGCTCTCCCTGTACTTGCCGGTGTTGCTGATGATGCCGCTGGCGCTGGCGTCCTACCTCCTGCTGCAGGCCACGCCCCAGCCCATGGAGCCCGAGCCCGAGCGACTGCTCACCAACGAACCCGACTTCTTCATGCGGCGGTTTTCCGTCAAGGTGTTTGCACCCAACGGGACATTGCAAACCGAGGTCTACGGCGCCGAGGCCCGCCACCACCCCGACACGGACCGCACGGTCATCGACACCGCACGCATCCGCACCTACAGCGCGCAACGCCAGCTCTCCACGGCCACAGCGCGCGAGATCATCAGCAACGGCGAGGGCACGGTTTACGAGCTCAGGGGCGATGCGGTGGTGGTGCGCCAGGCCGCACGCAACGCCGCTGGCCAGCGCTTGCCGCGCATGGAGTTCCACGGCGAATTTCTGCGGGTGAGCACCGACCCCGAACACATCGAATCGGATCTTCCGGTGCTCTTGATCCGTGACAAGGACCAGATGACGGCGGACACGCTCGACTACCGCGGTGATTCGCGCGTCGTCGAACTCAATGGCCGGGTTCGCGCCCAGCTCGCGCCGCGCTGA
PROTEIN sequence
Length: 217
VNAPAPPTDPQAKKRRRGLSRVWDQLSLYLPVLLMMPLALASYLLLQATPQPMEPEPERLLTNEPDFFMRRFSVKVFAPNGTLQTEVYGAEARHHPDTDRTVIDTARIRTYSAQRQLSTATAREIISNGEGTVYELRGDAVVVRQAARNAAGQRLPRMEFHGEFLRVSTDPEHIESDLPVLLIRDKDQMTADTLDYRGDSRVVELNGRVRAQLAPR*