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S15_scaffold_340_curated_28

Organism: S15_Afipia_broomeae_61_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(33765..34970)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 333.0
  • Bit_score: 616
  • Evalue 2.10e-173
tRNA pseudouridine synthase B n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P5G8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 333.0
  • Bit_score: 616
  • Evalue 1.50e-173
  • rbh
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 368.0
  • Bit_score: 538
  • Evalue 1.10e-150
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGACGATGACTGTTCCAAACCGCGCGATCGAACCGCAATCCGCCGATTCGAACGCGGTGAGCGAAAATAAATTTTCCGATGCGCACCGCAAGGCGGATGGCACTCATGTTTCGGTTACCTCCCCCCTTGTGGGGGAGGTCGACGCGCAGCGTCGGGAGGGGGGTGAGCAACGGACGGCAATGCGTCAATCTACCCCCCTCCCCAACCCTCCCCCACAAGGGGGGAGGGAGCAGAAAAAAGGCGGCCAGCAGAAGCGCGACCGCCGTGACGTCCATGGCTGGGTGATTCTCGACAAGCCGATCGGCATGACGTCGACGCACGCGGTCGCCGTGCTCAAGCGCCTGTTCAATGCCAAACGCGCGGGCCATGCCGGCACCCTCGATCCGCTCGCTTCAGGCGGATTGCCGATTGCGCTCGGCGAAGCCACCAAGACCGTTCCGTTCGTGATGGACGGCCGCAAGCGCTACCGCTTCACAGTGCAGTGGGGCGAGGAGCGCGACACCGACGACACCGAGGGCCGCGCCACCCAGACCAGCCCTGCCCGGCCCACCGCCGAGGCGATCCGGGCCCTGCTGCCGCAGTTCACCGGAACCATCGAACAGATCCCGCCACAGTATTCGGCGATCAAGATTCAGGGCGAACGGGCCTATGACATGGCGCGCGACGGCGAAGTGGTCCCGTTGCAGCCCCGGCCGGTCGAAATTCACGAATTAACCCTTGTGGAACAACTAGATGGCGACCGCTCGGTATTCGAAGCCGAATGCGGCAAGGGCACCTATGTCCGGGCGCTGGCCCGCGATATGGGCCGGATTCTCGGGTGTTTTGGCCATATTTGCGCGCTCCGGCGCACGATTTGCGGGCCTTTTACCGAAGCGGACATGATTCCACTGGCAGATCTGGAGGCTTTGTGCGATAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnGCCCGTTGAGACCGCGCTGTACGACATCCCGGCACTGGCCGTCACACGGGCGGATGCCGCAAGGCTCCACCGGGGCCAAGCGGTTTTGTTGCGCGGACGGGATGCGCCAATTTCAAACGGCACAGTCTATGCCACCGTCGGAGGAAGGCTTCTGGCCCTCGCCGAGATTGGCAATGGCGAACTCATCCCCAAGCGTGTGTTCAACCTGACCGGGCTGACAGCTCATCCCGGCCGCAAAGAAGGTGTTTGA
PROTEIN sequence
Length: 402
MTMTVPNRAIEPQSADSNAVSENKFSDAHRKADGTHVSVTSPLVGEVDAQRREGGEQRTAMRQSTPLPNPPPQGGREQKKGGQQKRDRRDVHGWVILDKPIGMTSTHAVAVLKRLFNAKRAGHAGTLDPLASGGLPIALGEATKTVPFVMDGRKRYRFTVQWGEERDTDDTEGRATQTSPARPTAEAIRALLPQFTGTIEQIPPQYSAIKIQGERAYDMARDGEVVPLQPRPVEIHELTLVEQLDGDRSVFEAECGKGTYVRALARDMGRILGCFGHICALRRTICGPFTEADMIPLADLEALCDXXXXXXXXXXXXXXPVETALYDIPALAVTRADAARLHRGQAVLLRGRDAPISNGTVYATVGGRLLALAEIGNGELIPKRVFNLTGLTAHPGRKEGV*