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S15_scaffold_359_curated_30

Organism: S15_Afipia_broomeae_61_15_curated

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(26125..27339)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Afipia birgiae RepID=UPI0002E07D59 similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 404.0
  • Bit_score: 696
  • Evalue 8.80e-198
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS34850.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 396.0
  • Bit_score: 672
  • Evalue 3.30e-190
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 368.0
  • Bit_score: 488
  • Evalue 1.30e-135
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGCACCCGCGTTCTCACGCGATGACTTCAATGGCCCTGCTTTTTGGGGCCGCGGTTCTCCTCTCCGGCTGTAACGATCAGAGCGTCGCTTCCGTCCAGCCGCCCGAGCCCCCCGAAGTCAGCATTGTCACCGTCAAGGCATCGCCGCAGGCCATCATCCGCGAACTTCCGGGCCGCATCGCGCCGCTGCGGGTCGCCGACGTTCGCCCGCGGGTGTCCGGCATCATTGTCGAGCGCCTGTTCGAGCAGGGCAGCGAGGTGAAAGCCGGCGACGCGTTGTACCAGATCGATCCGAAACCTTTTGAAGTCGAATTGCAGGCGGCGGAAGCCGCGCTCGCCAAGGCCGAGGCGGTGCTGCAGCAGGCATCGCAGCACGCCGTGCGCATCGAAACTCTGACCAAGAGTCAGGCGGCCTCAACCGCCTCCAATGAAGTCGCGATCGCAAATCTGGCGCAGGCCAAGGCTGAAGTCGGCGCACGCACCGCCGACGTGTCGCGCGCGCGCCTCAACCTCGGCTACGCCACGATCCGTGCGCCGATCAGCGGCATCATCGGCGCCGCGCTGCTCAGCGAAGGCGTTCTCGTTGTGCAGAACGAAACCCATGCGCTGGCGACGATCCAGCAGCTCAATTCCGTCTACGCCGACTTCACCCAGTCGGTGAACGACATGAACCGGCTGCGCCGCGATTTCGAACGCGGCGATCTCGATCGCGTCTCGGAAGACGCGGCCAGGGTTCGCCTCGTGCTCGACGAGGGCGCCGCCTATCCGCTGGCCGGCAAGCTGTTGTTCTCCGACACCAAGGTCGATGCCGGCACGGGTCAGGTGACGCTGCGCGGCGAGTTCAAGAATCCGGGCCGCGAATTGCTGCCCGGCATGTTCGTGCGCGTGCTGATCGAGCAGGGCCGCGACCCCGACGCCATCGTGGTGCCGCCGCAGGCGATCCAGCGCAATTCGTCCGGCGCCAGCGAAGTGTTCGTGGTGAAGGATGATAGCCGCATCGTCGCGCAGCCGGTCCGCACCGGCGGTCTCATCGACGGCCAGTGGCTGATTACCGAAGGGCTCAAGCCCGGCCAGCGCGTGGTGGTCGAAGGCTTCCAGAAGTTCGTGGTCGGCGACGCCGTCAAGGCCAGCGACTGGCGGGTGTCCGGCGAAACCGGCCGTCATCTCGACAAATCGGCGGCCGCCAGCGTCTCCGAGCCATCTCGGATCAGGTGA
PROTEIN sequence
Length: 405
MHPRSHAMTSMALLFGAAVLLSGCNDQSVASVQPPEPPEVSIVTVKASPQAIIRELPGRIAPLRVADVRPRVSGIIVERLFEQGSEVKAGDALYQIDPKPFEVELQAAEAALAKAEAVLQQASQHAVRIETLTKSQAASTASNEVAIANLAQAKAEVGARTADVSRARLNLGYATIRAPISGIIGAALLSEGVLVVQNETHALATIQQLNSVYADFTQSVNDMNRLRRDFERGDLDRVSEDAARVRLVLDEGAAYPLAGKLLFSDTKVDAGTGQVTLRGEFKNPGRELLPGMFVRVLIEQGRDPDAIVVPPQAIQRNSSGASEVFVVKDDSRIVAQPVRTGGLIDGQWLITEGLKPGQRVVVEGFQKFVVGDAVKASDWRVSGETGRHLDKSAAASVSEPSRIR*