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S15_scaffold_116_curated_5

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(6180..6818)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KD70_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 212.0
  • Bit_score: 399
  • Evalue 1.50e-108
  • rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:BAQ80706.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 212.0
  • Bit_score: 419
  • Evalue 2.60e-114
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 212.0
  • Bit_score: 400
  • Evalue 1.90e-109

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGAGCCAGGAAGCGCGCTTTTCCCGTCTGGAACCCGACCTGCGCAAGGCCGAGCTGATCGAGGCGACCCTGACCTGCCTCAAGCGCCACGGTTTTCAGGGGGCGTCGATCCGCAAGATCTCCGCCGAGGCCGGGGTGTCGGTGGGGCTGATCAGCCATCACTACGCCGGCAAGGACGAGTTGGTGGCCCAGGCGTATCGGGCGGTCACCGGGCGGGTCATGAACTTGCTGCGCGAAGCCATGGAGCAGGCCGCGCCCGATCCCCGGGAGCGGTTGTCGGCGTTCTTCCGTGCCTCGTTCTGCGCCGAACTGCTGGACCCCAAGCTGCTGGACGCCTGGCTGGCGTTCTGGGGCGCGGTAAAGACTGCCGAGGCGATCAACCTGGCCCATGAACATTCCTACGGCGAATACCGCAACGAGCTGGCCAGCCTGCTGACCCGCTTGGCCGGGGAGCAGGGCTGGGCGCAGTTCGACGCCGATCTGGCGGCCATCAGCCTCAGTGCCTTGCTCGACGGCCTATGGCTGGAGTCCGGGCTCAACCCCGGGACCTTCAGCCCGCAGCAGGGCGTGCAGATCTGTGAAGCCTGGGTTGAGGGCTTGCTGGCCAGCCAGGGGCGCGGGTTTATCAGGCCGACATAG
PROTEIN sequence
Length: 213
MSQEARFSRLEPDLRKAELIEATLTCLKRHGFQGASIRKISAEAGVSVGLISHHYAGKDELVAQAYRAVTGRVMNLLREAMEQAAPDPRERLSAFFRASFCAELLDPKLLDAWLAFWGAVKTAEAINLAHEHSYGEYRNELASLLTRLAGEQGWAQFDADLAAISLSALLDGLWLESGLNPGTFSPQQGVQICEAWVEGLLASQGRGFIRPT*