ggKbase home page

S15_scaffold_116_curated_7

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(8180..9253)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein, PotD/PotF family n=1 Tax=Pseudomonas protegens CHA0 RepID=R4R8A3_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 357.0
  • Bit_score: 704
  • Evalue 3.70e-200
  • rbh
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 357.0
  • Bit_score: 706
  • Evalue 3.60e-201
ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAQ80704.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 357.0
  • Bit_score: 688
  • Evalue 3.00e-195

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1074
ATGAAAGCGCTCACCCGCAAGCACGGTTGTTCTTTCCTGGCCCTGAGCCTGGCCTTGGGTCTGACCCTGGGCCAGCCGCTGATTCACAACAAGGCCCAGGCAGCCCCCGACATGGTGGTCGTGGCGTACGGCGGAGCCGGACAAAAAGCCCAGGACGTGGCGTTGTTCCAACCCTTCAGCAAGGCCGATGGCAGCAAGCTGATCCAGAGCGAATACAACGGCGAAATGGCCCGGATCAAGGTCATGGTCGACACCGGCAACGTCGATTGGGACCTGGTGCAGATCGAAGGCCCGGACCTGATGCGCGGCTGCGAGGAGGGCATGTACGAGCCCCTGGACTGGAAGACTCTGGGCCGTGCCGAGCAGCTGATTCCAGATGCCGCTCAGCCCTGCGGCTCGGCGGTGCTGGTGTGGAGCGTGGCCATTGCCTACGACCGCAACAAGCTGGCCAAGGCCCCGGCGTCCTGGGCGGATTTCTGGGACGTCAAGCAGTTCCCCGGCAAGCGCGGCCTGCGCAAGCGCGCGGTGTACAACCTGGAATTCGCCCTGATGGCCGACGGGGTCAAGGTCGAGGACGTGTACAAGGTCCTGGCCACGCCCCAAGGGGTGGAACGGGCCTTCGCCAAGCTGACCGAGCTCAAGCCCTACATCCAGTGGTGGGAAGCCGGCGCCCAGCCGGGGCAGTGGCTGGCCGCCGGTGATGTGGTGATGACCTCCAGCTACAGCGGGCGTATCGCCGTGGCGGCCCAGGGCGGCGCCTCCCAGGCGGTGGTCTGGCCCGGCAGCCTGTACGGCATGGATTACTGGGCGATCATCAAGGGCTCGAAACACGTGGATCAGGCCAAGCGTTTCATCGCCTTCGCCAACACTCCCGAGGTCCAGGTCAACTACGTCAAGCAGATCCCCTATGGCCCGACCAACACCCTGGCCGCGGCCAAGCTCGACCCGGCGTTGGCGCAGTGGGTGCCGACCTCGGAACAGAACCTCAAGGACGCCCTGGCGATGAACGTGGAGTTCTGGGTCGATCATGGCGAAGAGCTGGAAGAGCGCTTCAACGCCTGGGCCAGCAAGTAA
PROTEIN sequence
Length: 358
MKALTRKHGCSFLALSLALGLTLGQPLIHNKAQAAPDMVVVAYGGAGQKAQDVALFQPFSKADGSKLIQSEYNGEMARIKVMVDTGNVDWDLVQIEGPDLMRGCEEGMYEPLDWKTLGRAEQLIPDAAQPCGSAVLVWSVAIAYDRNKLAKAPASWADFWDVKQFPGKRGLRKRAVYNLEFALMADGVKVEDVYKVLATPQGVERAFAKLTELKPYIQWWEAGAQPGQWLAAGDVVMTSSYSGRIAVAAQGGASQAVVWPGSLYGMDYWAIIKGSKHVDQAKRFIAFANTPEVQVNYVKQIPYGPTNTLAAAKLDPALAQWVPTSEQNLKDALAMNVEFWVDHGEELEERFNAWASK*