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S15_scaffold_116_curated_9

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 11494..12126

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RJK0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 210.0
  • Bit_score: 414
  • Evalue 4.50e-113
  • rbh
DNA-binding protein {ECO:0000313|EMBL:BAQ80702.1}; TaxID=1500687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. St29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 210.0
  • Bit_score: 426
  • Evalue 2.10e-116
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 210.0
  • Bit_score: 424
  • Evalue 9.50e-117

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Taxonomy

Pseudomonas sp. St29 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGAACCCCAGCAGCAAGACGCCGCCCGCGAGCCGCCCTCCCGCAGCGGAGCCCGGCACCGACAACCAGGCCCCTGGCGGCCCACAGTTTCTTGGCACCCGCATCCGCGGCCTGCGCAAACGCCGCGGCCTGACCCTGAGCGAACTGGCCCAGCAGAGCGAACTCACAGCCGGCTACATCAGCCAACTGGAACGCAACCTCGCCTACCCCTCCATCCCCGCCCTGTTCAACATTGCCCGCAGCCTGGGCGTGACCATCCAATGGTTCTTCGCCAGCGAAACCCAGACCGCGCCCGAGGATCAGGGCTATGTAGTGCGCAAGAAACAGCGGCTGCAGGTGAATTATGAGAACGGGGTTATCGATCAGCTGCTAACCCCACAACCGACCCGGCAGCTGGAGTTTTTACACTCACGGTTTCCGCCGGGGACCTACAGCAAGGAGAGTTACAGCCATGAGGGGGAAGAAGCCGGGTATGTGCTGTCAGGGAGTTTTGAGCTGTGGGTGGGGGAACGGTATTTTCAGCTGAGTGAGGGGGATAGTTTTAGCTTTTCCAGCCAGGAACCGCATAAGTATGGGAATCCTGGGGAGGAGGATGCGGTGGTGTTGTGGGTGATAACGCCGCCGACGTTTTGA
PROTEIN sequence
Length: 211
MNPSSKTPPASRPPAAEPGTDNQAPGGPQFLGTRIRGLRKRRGLTLSELAQQSELTAGYISQLERNLAYPSIPALFNIARSLGVTIQWFFASETQTAPEDQGYVVRKKQRLQVNYENGVIDQLLTPQPTRQLEFLHSRFPPGTYSKESYSHEGEEAGYVLSGSFELWVGERYFQLSEGDSFSFSSQEPHKYGNPGEEDAVVLWVITPPTF*