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S15_scaffold_427_curated_1

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(247..2637)

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein D n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KD20_PSEF5 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 798.0
  • Bit_score: 1444
  • Evalue 0.0
  • rbh
gspD; general secretion protein D similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 798.0
  • Bit_score: 1444
  • Evalue 0.0
  • rbh
General secretion pathway protein D {ECO:0000313|EMBL:AAY92029.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 798.0
  • Bit_score: 1444
  • Evalue 0.0

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Taxonomy

Pseudomonas protegens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2391
ATGAAGTGGTCAGGTTGCAATTACGTGCGCCAGTGTCGCAAGGCCGCACCTTTTCTGCTGCTGGCGTTGGGGGCCTGCAGCAACACCCCGTCCACCACGCCGCCGCCCTTGCTGGTGGACAGCGAACTGGGCCAGCCCCTGGCCAATACCCAGCGCAGCGGCGATGCCCTGCTGGATCGCCAACGCTTGCAGGCGCAACAGGCTCAACGGCCGAAAGTCCTGCACCCGGTGACCAACAGCAGTCGCGGCCACAGCAGCCCGCGCAGCACCAGTGTGCCGCGCAACCCCCTGGGGGATCAGCCGGTGCAACTGAACTTCGTCGACGCCGATATCCAGGCGGTGGTACGGGCCTTGTCCCGCTCCACCGGCCAGCAGTTCCTGGTGGACCCGCGGGTCAAGGGCAGCCTGACCCTGGTCAGCGAAGGCCAGGTGCCGGCCCACCAGGCCTACGACATGCTGCTGGCGGCGCTGCGCATGCAAGGCTTTTCCGTGGTGGACGTGGGCGGCGTGGCCCAGGTGGTGCCCGAGGCCGATGCCAAGCTGCTGGGCGGACCGATCTACAGCGCCGACAAGCCAGCGGGCAACGGCATGCTGACCCGCACCTTTCGCCTGCAATACGAAAATGCGGTGAACCTGATCCCGGTGCTGCGGCCTATCGTTTCGCCGAACAACCCGATCAACGCCTACCCGGGCAACAACAGCATCGTGGTCACCGACTATGCCGAGAACCTGCAGCGAGTCGCGCAGATCATCGACGGCATCGACACCCCCAGCGCCATCGACACCGATGTGGTGGCGGTGCAGAACGGCATCGCCGTGGACATCGCCACCATGGTGGCCGAACTGCTGGAAACCCAGGGCGCCGACCAGACCCAGAAAATCAGCGTGATTGGCGACCCGCGCTCCAACTCCATCATCATCCGTGCCGGCAGCCCGGAGCGCACCGAGCTGGCGCGCAACCTGATCTACAAACTGGACAACGCCCAGAGCAACCCGAGCAACCTGCACGTGGTCTACCTGCGCAACGCCCAGGCCGGCAAACTGGCCCAGGCCCTGCGCGGGCTGCTGACCGGCGAAAGCGACAGCGGCGGCAACGACGGCGCCCGGGCCATGCTCAGCGGCATGGGCGGCAACAGCCAGAGCGGCCAGAGCCCGACCCAGAACAGCAGCGGCACGCCCACCGGCAGCGGCAACGTCAGCAACAGTGGTAGCAGTGCCTACGGCCAGGGCAGCAACTCCGGCAGCGGTTTGAGCGGCACTGGCCAGGCAACGGATCAGAACACCGCCTTCAGCGCCGGCGGGGTCACCATCCAGGCCGACGCCACCACCAACACCTTGCTGATTTCCGCCCCGGACCCGCTGTATCGCAACCTGCGGGAAGTCATCGACCAGCTCGACCAGCGTCGCGCCCAAGTGGTGATCGAAAGCCTGATCGTCGAAGTGGGCGAGGACGACGCCAGCGAATTCGGCGTGCAGTGGCAGGCCGGCAACCTGGGTGGGCGTGGCGGCTTTGGCGGCGTCAACCTGGGCGGCAGCGGGCTGCTGGGCACCCCGGCCAGCAAGACCAGCATCGACGTCTTGCCCAAGGGCCTGAACATCGGCGTGGTCAACGGCACCGTGGACATCCCGGGGATCGGCAAGGTGCTGGACCTCAAGGTCCTGGCCCGGGCGTTGAAGAGCAAGGGCGGGACCAACGTGTTGTCGACGCCGAATCTTTTGACCCTGGACAACGAGGCGGCGAGCATTTTTGTTGGCCAGACCATTCCCTTTGTCACCGGCAGCTATGTCACCGGAGGCGGCGGCACCAGCAACAACCCGTTCCAGACCGTGCAGCGTGAAGAAGTGGGCCTGAAGCTCAATGTGCGGCCGCAGATTTCCGAGGGTGGCACGGTCAAGCTGGACATCTACCAGGAAGTCAGCAGCGTTGACCCTCGCGCCTCGGTGGATGCCGGGACCGTGACCAACAAACGTGCGATCGATACCAGCATCCTCTTGGATGACGGGCAGATCATGGTGCTAGGTGGGTTGCTGCAGGACGGTTACAGCCAGAGCAATGACGCGGTGCCGTGGCTGTCGAGTATTCCTGGACTTGGGGCATTGTTTCGCAATGAGAAGCGCAGCATTACCAAGACCAACCTGATGGTGTTCCTGCGGCCTTACATCATTCGCGACAGTGGCGCGGGGCGCAGTATTACCCTCAATCGTTACGACTTCATGCGTCGGGCGCAGGGGGAGTTGCAGCCGGAGCGCAGTTGGGCGATGCCGGATATGCAGGCGCCGCAGTTGCCTTCGGCGGCGAAGGCGATTCCGGGGGCGGTGCCGGTGTCGTTGCAGACGCCTGGGGTTGGGCAGGGGCCGCGGGCGACGATCAGGGCGGTGCCGGTGCAATGA
PROTEIN sequence
Length: 797
MKWSGCNYVRQCRKAAPFLLLALGACSNTPSTTPPPLLVDSELGQPLANTQRSGDALLDRQRLQAQQAQRPKVLHPVTNSSRGHSSPRSTSVPRNPLGDQPVQLNFVDADIQAVVRALSRSTGQQFLVDPRVKGSLTLVSEGQVPAHQAYDMLLAALRMQGFSVVDVGGVAQVVPEADAKLLGGPIYSADKPAGNGMLTRTFRLQYENAVNLIPVLRPIVSPNNPINAYPGNNSIVVTDYAENLQRVAQIIDGIDTPSAIDTDVVAVQNGIAVDIATMVAELLETQGADQTQKISVIGDPRSNSIIIRAGSPERTELARNLIYKLDNAQSNPSNLHVVYLRNAQAGKLAQALRGLLTGESDSGGNDGARAMLSGMGGNSQSGQSPTQNSSGTPTGSGNVSNSGSSAYGQGSNSGSGLSGTGQATDQNTAFSAGGVTIQADATTNTLLISAPDPLYRNLREVIDQLDQRRAQVVIESLIVEVGEDDASEFGVQWQAGNLGGRGGFGGVNLGGSGLLGTPASKTSIDVLPKGLNIGVVNGTVDIPGIGKVLDLKVLARALKSKGGTNVLSTPNLLTLDNEAASIFVGQTIPFVTGSYVTGGGGTSNNPFQTVQREEVGLKLNVRPQISEGGTVKLDIYQEVSSVDPRASVDAGTVTNKRAIDTSILLDDGQIMVLGGLLQDGYSQSNDAVPWLSSIPGLGALFRNEKRSITKTNLMVFLRPYIIRDSGAGRSITLNRYDFMRRAQGELQPERSWAMPDMQAPQLPSAAKAIPGAVPVSLQTPGVGQGPRATIRAVPVQ*