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S15_scaffold_427_curated_2

Organism: S15_RifCSP_Pseudomonas_62_25_curated

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2634..3206)

Top 3 Functional Annotations

Value Algorithm Source
Putative type II secretion system protein n=1 Tax=Pseudomonas protegens CHA0 RepID=R4RJA7_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 192.0
  • Bit_score: 298
  • Evalue 3.30e-78
General secretion protein M {ECO:0000313|EMBL:BAQ74991.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 190.0
  • Bit_score: 323
  • Evalue 1.30e-85
putative type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 192.0
  • Bit_score: 298
  • Evalue 9.30e-79

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Taxonomy

Pseudomonas sp. Os17 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAATAAGGCCAGGCTGGCGCAGTATCAGGCGCGCTGGTCGCGCCTGCGGACCCAGGTCCATATCCACGTCCAGGGCCATTGGAACACTCTGGCGCTGCGGGAAAAACGCCTGCTGAGCGCCACCGCCCTGGGCGTGCTGGGGCTGTTGCTGTGGTGGCTGCTGATCCAGCCGCCGCTGAAGACGATCGATTACTGGCAAGCCGAGACGCCGAAGCTGCGCGCCCAGGCCGAGGCCCTGGAAGTGCTGTTGCACGAGGCGGCGGGCCCTGACAGCCGGGGCGCGAGCCTTGAGCAATCCCTGCGCCAGACCCTGGAAGGCGCCGGGCTCAAGGACCACTACCAGTTGCAACAGCCTGATGAAGCCGGCCCCGAGAGCTGGCGGTTGACCTTTGAGCAGGCCCCGGCGGATGCCGTGGTCGGCTGGCTGCTGGGGGCTCCCCGGCAGCTTTCACTGCAGGTGGTGGAGGCCCGTCTGCAACGCGCAGCCGCGGCCGCCGCCCAAGACTCGGCAGGCACACTGTCCGGGACCGTTCGCATGGATCAGGCGCAGGGCGCTAAGGAAGCTTCATGA
PROTEIN sequence
Length: 191
MNKARLAQYQARWSRLRTQVHIHVQGHWNTLALREKRLLSATALGVLGLLLWWLLIQPPLKTIDYWQAETPKLRAQAEALEVLLHEAAGPDSRGASLEQSLRQTLEGAGLKDHYQLQQPDEAGPESWRLTFEQAPADAVVGWLLGAPRQLSLQVVEARLQRAAAAAAQDSAGTLSGTVRMDQAQGAKEAS*